Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence30.58%DateThu Jan 5 11:37:54 GMT 2012
Rank389Aligned Residues117
% Identity15%Templatec3fs2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210...... ...220.........230.........240.........250........
Predicted Secondary structure 









......




















Query SS confidence 































. . . . . .









































Query Sequence  YFVLNGTSAANKVVTNALLTRGDLVLFDRNNH. . . . . . KSNHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLR
Query Conservation   






 

 
 
 
    

 


 

 
......


  







 



 
     
 

 
    

 
 
 
Alig confidence 































......




.













......................
Template Conservation    



    
  

   
  



 

 
      
   


. 
   

  
 
  ......................
Template Sequence  VLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLA. KITESGNPNVLATE. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
GGGTT
TTS

TT

GGG.TTT


......................
Template Predicted Secondary structure 















.



......................
Template SS confidence 















































































   113......120.........130.........140.........150..... ....160.........
 
   259260.........270.........280.........290.........300.........310...... ...320.........330.......
Predicted Secondary structure 


















.




















Query SS confidence 

























































.




















Query Sequence  QQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYE. QFIPMMADSSPLLLELNENDP
Query Conservation    
   
  

        







 

  

  
    
     









 . 


     
  

  


  
Alig confidence  ...................











.





.


















.



















.
Template Conservation  ...................

  

      .

  
 . 
     

  
 


 
  
    
  
  



 

 
.
Template Sequence  . . . . . . . . . . . . . . . . . . . RGVSFGYNTLVS. DMRALP. IMAGLGAPVIFDATHSVQQPGQREFVETLARAAVAVGVAG.
Template Known Secondary structure  ...................


SSS

.
TT.TTTS
T




GGG

S.
Template Predicted Secondary structure  ...................








.
.

















.
Template SS confidence 















































































   170.........180. ...... ..190.........200.........210.........220.......
 
   338.340.........
Predicted Secondary structure 





Query SS confidence 











Query Sequence  GIFVTQSVHKQQ
Query Conservation   





 



Alig confidence  ..




.



Template Conservation  ..  

 .
   
Template Sequence  . . FFIET. HEDP
Template Known Secondary structure  ...SSG
Template Predicted Secondary structure  ...



Template SS confidence 











   236...240 ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions