Job Description P21169 Confidence 99.80% Date Thu Jan 5 11:37:54 GMT 2012 Rank 81 Aligned Residues 303 % Identity 13% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																.	.	.																																							.	.
Query SS confidence																.	.	.																																							.	.
Query Sequence		S	A	K	D	A	Q	K	F	A	A	K	V	F	H	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	.	.	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F
Query Conservation																.	.	.																																							.	.
Alig confidence																.	.	.																																							.	.				.																			.
Template Conservation																																																														.																			.
Template Sequence		T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	F	T	K	K	D	K	V	L	V	I	D	G	G	S	F	G	H	R	F	V	Q	.	L	C	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	K	.
Template Known Secondary structure															T			T	T							S	S																T	T								S	S									.					T	T										T	T		.
Template Predicted Secondary structure																																																														.																			.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P
Query Conservation																																												.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.							.																																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	L	T	K	E	K	L	Y	E	Y	D	N	Q	N	F	T	G	.	.	.	.	.	.	.	.	.	.	L	L	V	N	V	D	E	T	S	T	A	V	L	Y	D	T	X	X	I	G	E	F	C	K	K	N	N	X	F	F	V	C	D	C	V	S	A	F	L	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T	T	T	S					.	.	.	.	.	.	.	.	.	.					S			T	T	T	T															T	T								T	T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
											112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	.	.	.	.	.	.	.	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.									.																.	.	.	.	.	.	.
Template Conservation		.	.	.													.	.	.	.									.
Template Sequence		.	.	.	A	D	P	F	N	X	N	E	C	G	A	D	.	.	.	.	V	X	I	T	G	S	Q	V	.	L	A	C	P	P	G	I	S	V	I	V	L	A	P	R	G	V	E	R	V	E	K	S	K	V	R	T	X	Y	F	D	L	K	D	A	L	K	N	Q	E	R	G	Q	T	P	F	T	P	A	V	G	I
Template Known Secondary structure		.	.	.	T	S								T		S	.	.	.	.									.					S	S																T						S	T	T										T	T	T			S	S
Template Predicted Secondary structure		.	.	.													.	.	.	.									.
Template SS confidence
					168	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D	F	R	A	K	I	K	D	L	P	F	E	L	V	S	E	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T																				T	T	T	S	S						S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	.	.	.	.	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A
Query Conservation																																																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	N	G	V	T	S	V	H	P	T	T	A	N	.	.	.	.	.	.	.	.	.	.	.	A	Y	D	I	F	L	K	L	K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	K	D	T	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	B	T	T							S	S	S		.	.	.	.	.	.	.	.	.	.	.												S	S								G	G	G	T	T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												288	.	290	.	.	.	.	.	.	.	.	.	300												.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	A	Q	F	E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	K	D	L	Q	K	R
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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