Job Description P21169 Confidence 99.74% Date Thu Jan 5 11:37:54 GMT 2012 Rank 109 Aligned Residues 290 % Identity 14% Template c3eucB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution Resolution 2.05 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	.	.	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F
Query Conservation																							.	.
Alig confidence																							.	.																																						.																			.
Template Conservation																																																														.																			.
Template Sequence		G	E	V	S	S	E	A	L	R	A	K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X	L	A	L	A	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	X	Y	A	X	.	S	A	Q	F	A	G	L	E	F	V	G	V	P	L	R	A	D	F	.
Template Known Secondary structure																		T			T	T																				T			T	T								S								.					T	T										T	T		.
Template Predicted Secondary structure																																																														.																			.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																															.					.	.	.
Query SS confidence																																															.					.	.	.
Query Sequence		G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	.	G	T	V	Y	.	.	.	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q
Query Conservation																																															.					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.															.					.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																													.
Template Sequence		.	.	.	.	.	.	.	.	.	T	L	D	R	G	A	X	L	A	A	X	A	E	.	.	.	.	.	.	.	.	.	H	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	.	A	Y	Q	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.				S						S	S		T	T	T																T	B	T	T	S		B								.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																													.
Template SS confidence
											142	.	.	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L
Query Conservation
Alig confidence					.	.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	Q	.	.	E	S	W	X	S	R	L	T	D	F	G	N	L	.	.	.	.	L	V	X	R	T	V	S	K	L	G	L	A	G	I	R	L	G	Y	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	D	P	Q	W	L	E	Q	L	D	K	V	R	P	P	Y	N	V	N	V	L	T	E	A	T	A
Template Known Secondary structure		S	S	S	.	.			S	G	G	G	G	G	T		T	T		.	.	.	.									T	T		S	S									.	.	.	.	.	.	.	.	.	.	.	.									G	G	G	S		T	T		S
Template Predicted Secondary structure					.	.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A
Query Conservation
Alig confidence										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	A	L	E	H	V	A	.	.	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V	F	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T				.	.																						T	S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.					.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	.	.	.	.	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q
Query Conservation																																																									.	.	.	.
Alig confidence		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.							.
Template Conservation		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		.	.	.	.	.	.	A	A	N	F	L	L	A	R	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	.	T	P	E	E	N	A	Q	F	L	E	A	F	A	A
Template Known Secondary structure		.	.	.	.	.	.	S	S	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T							T	T	S		G	G	G	T	T								.
Template Predicted Secondary structure		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
								304	.	.	.	.	.	310	.	.	.															.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.
		554
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions