Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence52.76%DateThu Jan 5 11:37:54 GMT 2012
Rank352Aligned Residues118
% Identity11%Templatec3eezA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310... ......320.....
Predicted Secondary structure 



















......









Query SS confidence 





























































. . . . . .











Query Sequence  FNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWV. . . . . . GYEQFIPMMADS
Query Conservation 

 
 
   
   
  

        







 

  

  
    
     







......

  


     
Alig confidence 















..........



































......











Template Conservation           
     
.......... 
  
    



        
   
            
   
  



  
  
Template Sequence  VTLQDAARVARDGLAE. . . . . . . . . . VFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSVLADAEALHLAATIPDH
Template Known Secondary structure 
STT

S..........TSTT

SS
STS
GG
Template Predicted Secondary structure 






..........


















Template SS confidence 















































































   245....250.........260 .........270.........280.........290.........300.........310....
 
   326...330.........340.........350.........360.........370.........380.....
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  SPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHA
Query Conservation 
  

  


   





 










 


           

  

  

   
Alig confidence 









....





























..













Template Conservation     
      ....                
 
 

  





.. 
   
        
Template Sequence  ACHAVWACQD. . . . MLTVDIAGGRGPRNIDGHLHLPETPGLGVH. . PDEDALGDPVAVYS
Template Known Secondary structure  GB

B

SGG....GBS

TTTT
SS

BTT



SSBTS

..

TTSS
S
S
Template Predicted Secondary structure 









....






















..



Template SS confidence 



























































   315....320.... .....330.........340.........350.... .....360........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions