Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence89.45%DateThu Jan 5 11:37:54 GMT 2012
Rank243Aligned Residues70
% Identity16%Templatec3edeB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cyclomaltodextrinase; PDBTitle: structural base for cyclodextrin hydrolysis
Resolution1.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230......... 240.........250.........260.........270.........280.........290.........300
Predicted Secondary structure 






......
























Query SS confidence 












. . . . . .




























































Query Sequence  AGATPVYLEASRN. . . . . . PFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVG
Query Conservation 


 



 
   ......  
 

 
    

 
 
   
   
  

        







 

  

  
    
Alig confidence 












......














..............................















Template Conservation 



 
 
 

         



   

  


..............................  

 



 

  

Template Sequence  LGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RYGSNEDFVRLSTEAR
Template Known Secondary structure  TT







SS
GGG

S
S
T..............................TT

Template Predicted Secondary structure 





























..............................



Template SS confidence 















































































   160.........170.........180.........190... ......200.........
 
   301........310.........320......
Predicted Secondary structure 

















Query SS confidence 

























Query Sequence  HLCDYILFDSAWVGYEQFIPMMADSS
Query Conservation       









  


     
Alig confidence 

























Template Conservation    






 
 

         
 
Template Sequence  KRGMGLIQDVVLSHIGKHHWWMKDLP
Template Known Secondary structure  TT


SB

TT
GGGGS
S
Template Predicted Secondary structure 















Template SS confidence 

























   210.........220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions