Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence28.76%DateThu Jan 5 11:37:54 GMT 2012
Rank397Aligned Residues112
% Identity13%Templatec3ddmD_
PDB info PDB header:lyaseChain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310 ...... ...320...
Predicted Secondary structure 
















.......



.






Query SS confidence 


























































. . . . . . .





.






Query Sequence  FNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDS. . . . . . . AWVGYE. QFIPMMA
Query Conservation 

 
 
   
   
  

        







 

  

  
    
     




.......




 . 


   
Alig confidence 















..........
































.......





.






Template Conservation           
     
.......... 
  
    



    
   
   

    
     
  

  

 

     
Template Sequence  AGVAAFETALAARSLR. . . . . . . . . . VMQPDLAKWGGFSGCLPVARAVVAAGLRYCPHYLGAGIGLQASAHLLAAVPGLA
Template Known Secondary structure 
ST
..........


TTTTTTT



S
S

SS
Template Predicted Secondary structure 






..........




















Template SS confidence 















































































   261........270...... ...280.........290.........300.........310.........320.........330
 
   324.....330.........340.........350.........360.........370.........380
Predicted Secondary structure 




































Query SS confidence 
























































Query Sequence  DSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNA
Query Conservation    
  

  


   





 










 


           

  

  
Alig confidence 











....















.












..








Template Conservation              ....               
.   

  





.. 
   
   
Template Sequence  SPGLLGVDANDN. . . . PLRSLLSPALATLHEG. RITLGGAPGLGVT. . PDLAALRAA
Template Known Secondary structure  S


S

....TS
GGGGG

SS.

S
SBTS

..

TT
Template Predicted Secondary structure 










....






.








..

Template SS confidence 
























































   331........340.. .......350........ .360.........370. ........380
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions