Job Description P21169 Confidence 99.66% Date Thu Jan 5 11:37:54 GMT 2012 Rank 155 Aligned Residues 295 % Identity 12% Template c3cq6E_ PDB info PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) Resolution 2.10 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		L	I	H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	H	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																																										.
Template Conservation																																																																					.
Template Sequence		R	Y	P	E	R	D	A	V	E	L	R	D	E	L	A	A	Y	I	T	K	Q	T	G	V	A	V	T	R	D	N	L	W	A	A	N	G	S	N	E	I	L	Q	Q	L	L	Q	A	F	G	G	P	G	R	T	A	L	G	F	Q	P	S	Y	S	M	H	P	I	.	L	A	K	G	T	H	T	E	F	I	A	V
Template Known Secondary structure		S				T	T																	S					G	G	G					S														S		T	T								S			T					.					T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.
Template Conservation								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.
Template Sequence		S	R	G	A	D	F	.	.	.	.	.	.	.	.	.	.	R	I	D	M	D	V	A	L	E	E	I	R	A	K	Q	P	D	I	V	.	.	.	.	.	.	.	.	F	V	T	T	P	N	N	P	T	G	D	V	T	S	L	D	D	V	E	R	I	I	N	V	A	P	G	I	V	I	V	D	E	A	Y	A	.
Template Known Secondary structure					T	T	S	.	.	.	.	.	.	.	.	.	.	S																S			.	.	.	.	.	.	.	.				S	S		T	T	T																	S	S							T	T	G	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.
Template SS confidence
		141	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F
Query Conservation
Alig confidence								.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	S	P	S	P	.	.	.	S	A	T	T	L	L	E	K	Y	P	T	K	.	.	.	.	L	V	V	S	R	T	M	S	A	F	D	F	A	G	G	R	L	G	Y	F	V	.	.	.	.	.	.	.	.	.	.	.	A	N	P	A	F	I	D	A	V	M	L	V	R	L	P	Y	H	L	S	A	L	S	Q
Template Known Secondary structure		G	G		S	S		.	.	.		G	G	G	G	T	T	T		T	T	T	.	.	.	.											S		G	G	G							.	.	.	.	.	.	.	.	.	.	.										T	T	T	S		T	T		S
Template Predicted Secondary structure								.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240												.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E
Query Conservation
Alig confidence															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	I	V	A	L	R	H	S	A	D	T	.	.	L	G	T	V	E	K	L	S	V	E	R	V	R	V	A	A	R	L	E	E	L	G	Y	A	V	V	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T					.	.	T	T																				T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																										.								.
Template Conservation		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																										.								.
Template Sequence		.	.	.	.	.	.	.	.	.	E	S	N	F	V	F	F	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	D	Q	H	A	A	W	Q	A	F	L	D	R	G	V	L	I	R	D	V	G	I	A	G	.	H	L	R	T	T	I	G	.	V	P	E	E	N	D	A	F	L	D	A	A	A	E	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.		S	S											T	T				B			S		T	T	.								.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																										.								.
Template SS confidence
											306	.	.	.	310	.	.	.	.														.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		555	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	L
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions