Job Description P21169 Confidence 99.56% Date Thu Jan 5 11:37:54 GMT 2012 Rank 193 Aligned Residues 332 % Identity 11% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.							.	.	.
Query SS confidence																										.	.	.	.	.							.	.	.
Query Sequence		V	K	L	G	D	L	L	I	H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	.	.	.	.	.	H	A	D	K	T	Y	.	.	.	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A
Query Conservation																										.	.	.	.	.							.	.	.
Alig confidence																										.	.	.	.	.							.	.	.																																					.
Template Conservation																																																																												.
Template Sequence		D	E	I	F	P	Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	N	Y	K	L	.	V	F	N	T	R
Template Known Secondary structure		G	G	T	S	S				T	T																		T	T			G	G	G	B							S																T	T							S	S			T					.			T	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																										.									.	.	.											.	.
Query SS confidence																																																										.									.	.	.											.	.
Query Sequence		G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	N	.	.	.	A	R	Q	V	I	D	T	V	G	H	.	.
Query Conservation																																																										.									.	.	.											.	.
Alig confidence																			.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.							.									.	.	.											.	.
Template Conservation																			.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		N	G	A	N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	.	.	.	.	.	.	.	.	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	.	.	.	.	.	.	.	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A
Template Known Secondary structure		T										B		T	T	S		B	.	.	.	.	.	.	.	.		S												S	S				.	.	.	.	.	.	.					S	S		T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
					302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																.	.
Query SS confidence		.	.	.																																																.	.
Query Sequence		.	.	.	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	.	.	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R
Query Conservation		.	.	.																																																.	.
Alig confidence		.	.	.																																																.	.																	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		N	K	G	T	K	V	I	A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	.	.	.	.	.	.	.	T	T	K	E	V
Template Known Secondary structure			T	T										T	T	T	T		B		S	S				S								T	T			T	T													T	T		G	G	G								B					.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.								.	290	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A
Query Conservation
Alig confidence																																.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	K	V	K	G	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V	K	H	V	L	K	N	.	.	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	T	S	S													T	T	T	.	.																											T		G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	W	Q	A	Y	D	F	N	S	G	Y	F	.	.	.	.	M	A	I	K	V	H	D	V	D	.	.	.	.	.	.	.	.	.	.	.	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	A	L	N	A	T	D	I	R	I	A	F	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								B	S	S		.	.	.	.						S	S	S		.	.	.	.	.	.	.	.	.	.	.												T								S	S	S						G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	357	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.												.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F	E	Q	H	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure		.	G	S		G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions