Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence79.26%DateThu Jan 5 11:37:54 GMT 2012
Rank296Aligned Residues56
% Identity21%Templatec2wskA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycogen debranching enzyme; PDBTitle: crystal structure of glycogen debranching enzyme glgx from2 escherichia coli k-12
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230......... 240.........250.........260.........270.........280........
Predicted Secondary structure 






.............
























..
Query SS confidence 















. . . . . . . . . . . . .
















































. .
Query Sequence  LIQAGATPVYLEASRN. . . . . . . . . . . . . PFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGT. .
Query Conservation 





 



 
   .............  
 

 
    

 
 
   
   
  

        







 

..
Alig confidence 















.............














..............................



..
Template Conservation 

 


  
 
 

 
               


    
 


 .............................. 


  
Template Sequence  LKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYACSP
Template Known Secondary structure  T

S




TTT


SS



G..............................GG
SSG
Template Predicted Secondary structure 




































..............................





Template SS confidence 















































































   188.190.........200.........210.........220.........230. ......
 
   289290.........300.........
Predicted Secondary structure  ...


Query SS confidence  . . .




















Query Sequence  . . . VYNARQVIDTVGHLCDYILFD
Query Conservation  ...  

  
    
     



Alig confidence  ...




















Template Conservation       


 

  

  

 



Template Sequence  ETALDEFRDAIKALHKAGIEVILD
Template Known Secondary structure  GGTT
Template Predicted Secondary structure 




Template SS confidence 























   238.240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions