Job Description P21169 Confidence 99.66% Date Thu Jan 5 11:37:54 GMT 2012 Rank 157 Aligned Residues 306 % Identity 15% Template c2o1bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class i; PDBTitle: structure of aminotransferase from staphylococcus aureus Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		L	I	H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	H	.	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																						.
Template Sequence		Y	G	A	F	H	G	K	E	A	F	K	Q	A	I	V	D	F	Y	Q	R	Q	Y	N	V	T	L	D	K	E	D	E	V	C	I	L	Y	G	T	K	N	G	L	V	A	V	P	T	C	V	I	N	P	G	D	Y	V	L	L	P	D	P	G	Y	T	D	Y	L	A	.	G	V	L	L	A	D	G	K	P	V	P
Template Known Secondary structure					T	T																							T	T	T	S					S	S															T	T								S			S	S				.					T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	.	.	.	.	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D
Query Conservation																																																										.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	L	E	P	P	H	Y	L	P	.	.	.	.	.	.	.	.	.	D	W	S	K	V	D	S	Q	I	I	D	K	T	K	L	.	.	.	.	.	.	.	.	.	.	I	Y	L	T	Y	P	N	N	P	T	G	S	T	A	T	K	E	V	F	D	E	A	I	A	K	F	K	G	T	D	T	K	I	V	H	D
Template Known Secondary structure						T	T	T				.	.	.	.	.	.	.	.	.		G	G	G	S											.	.	.	.	.	.	.	.	.	.					S	S		T	T	T																	T	T	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	.	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S
Query Conservation																																											.
Alig confidence						.						.	.	.	.																												.															.	.	.	.	.	.	.	.	.
Template Conservation						.						.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Sequence		F	A	Y	G	.	A	F	G	F	D	.	.	.	.	A	K	N	P	S	I	L	A	S	E	N	G	K	D	V	A	I	E	I	Y	S	L	S	K	G	Y	N	X	S	G	F	R	V	G	F	A	V	G	N	K	D	X	.	.	.	.	.	.	.	.	.	I	Q	A	L	K	K	Y	Q	T	H	T	N	A	G	X
Template Known Secondary structure			T	T	T	.	T		B	S	S	.	.	.	.	S					G	G	G	S	T	T											S	T	T	T	T	T		G	G	G												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.						.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.		.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A
Query Conservation
Alig confidence																			.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	A	L	Q	D	A	A	I	Y	A	L	N	H	Y	D	D	.	.	F	L	E	E	Q	S	N	V	F	K	T	R	R	D	R	F	E	A	X	L	A	K	A	D	L	P	F	V	H	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			.	.																							T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.					.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																																		.																.	.	.	.
Query SS confidence																																																		.																.	.	.	.
Query Sequence		K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	.	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	.	.	.	.	L	F	L	L	T	P	A	E	S	H	E	K
Query Conservation																																																		.																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.												.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	I	Y	V	W	L	E	T	P	P	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	S	E	Q	F	E	Q	F	L	V	Q	E	K	S	I	L	V	A	P	G	K	P	F	G	E	N	G	N	R	Y	V	R	I	S	L	A	L	D	D	Q	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S	S								T	.	.	.	.	.	.	.	.	.	.	.	T																					S	G	G	G		G	G	G	T	T								S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	315	.	.	.	.	320	.	.	.	.	.												.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	L	V	A	M	L	A	Q	F	E	Q	H	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	A	A	I	R	L	T	E	L	A	Y	L	Y	E
Template Known Secondary structure											G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions