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Job DescriptionP21169
Confidence99.65%DateThu Jan 5 11:37:54 GMT 2012
Rank158Aligned Residues306
% Identity13%Templatec2o0rA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rv0858c (n-succinyldiaminopimelate aminotransferase); PDBTitle: the three-dimensional structure of n-succinyldiaminopimelate2 aminotransferase from mycobacterium tuberculosis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LIHEGSAKDAQKFAAKVFH. . . . . . . . ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVY
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Template Sequence  YPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP. VVAMAGAHRVT
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   57..60.........70.........80.........90.........100.........110.........120.... .....130.....
 
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Query Sequence  LEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDG. . . . TVYNARQVIDTVGHLCDYILFD
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Template Sequence  VPLVPDGRGF. . . . . . . ALDADALRRAVTPRTRA. . . . . . . . . . LIINSPHNPTGAVLSATELAAIAEIAVAANLVVITD
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Query Sequence  SAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSP
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Template Sequence  EVY. EHLVFD. . . HARHLPLAGFDGMAERTITISSAAMFNCTGWKIGWACGPAEL. . . . . . . . . IAGVRAAKQYLSYVGG
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   199200. ...... ..210.........220.........230.........240......... 250.........260.....
 
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Query Sequence  FYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAK
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Template Sequence  APFQPAVALALDTEDA. . WVAALRNSLRARRDRLAAGLTEIGFAVHDSY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
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   267..270.........280.. .......290.........300.........310...
 
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Query Sequence  WHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYL. RENGIVPEKCDLNSI. . . . . . . LFLLTPAESH
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Template Sequence  . . . . . . . . . . . . . . GTYFLCADPRPLG. . . . . . . . . YDDSTEFCAALPEKVGVAAIPMSAFCDPADVWNHLVRFTFCKRD
Template Known Secondary structure  ..............BSS
GGGT.........


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   314.....320...... ...330.........340.........350.........360.........370
 
   542.......550....
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Query Sequence  EKLAQLVAMLAQF
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Template Sequence  DTLDEAIRRLSVL
Template Known Secondary structure  GGG
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   379380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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