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Job DescriptionP21169
Confidence99.73%DateThu Jan 5 11:37:54 GMT 2012
Rank119Aligned Residues291
% Identity18%Templatec2nmpC_
PDB info PDB header:lyaseChain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190.........200.........210.........220...... ...230.........240...
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Query Sequence  AKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQ. . . . AGATPVYLEASRNPFGF
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Template Sequence  RNCLEKAVAALDGAKYCLAFASG. LAAT. VTITHLLKAGDQIICMDDVYGGTNR. YFRQVASEFGLKISFVDCS. . . . . .
Template Known Secondary structure  TT
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TT
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.TGGGTT


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   68.70.........80.........90 .... .....100.........110......... 120.........130........
 
   244.....250.........260.........270.........280... ......290.........300... ......310.........320.
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Query Sequence  IGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLG. TYDGTVYNARQVIDTVGHLC. DYILFDSAWVGYEQFIPM
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Template Sequence  . . . . . . . . . KIKLLEAAITPETKL. . . . . . . . . . VWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRP.
Template Known Secondary structure  .........S

TT..........SS
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   139140.........150... ......160.........170.........180.........190........
 
   322.......330.........340......... 350.........360.........370.........380......... 390......
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Query Sequence  MADSSPLLLELNENDPGIFVTQSVHKQQ. . AGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSP. . . FYPLFAA
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Template Sequence  . . . . . . . . LALGAD. . . . ISMYSATKYMNGHSDVVMGLVSVNCE. . . . . . . . SLHNRLRFLQNSLGAVPSPIDCYLCNRG
Template Known Secondary structure  ........TTTT
S....TTTTTT
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   199200.... .....210.........220.........230 .........240.........250........
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
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Query Sequence  LDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGY
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Template Sequence  LKTLHVRME. . . . . . . . . KHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTG. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT.........T
TT
TTSTTSTT
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   259260....... ..270.........280.........290.........300.........
 
   477..480.........490.........500.........510.........520....... ..
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Query Sequence  AADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYLRENGIVPEKCD. . . . . . . . . . . . . . . . . . . . . . . . . . . LN
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Template Sequence  . . . . . . . CTGMVTFYIKGTL. . . . . . . . . . QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDT
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SSS
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SSSS

GGGTTTTTS
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   310.........320.. .......330.........340.........350.........360.........370..
 
   530.........540.........550...
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Query Sequence  SILFLLTPAESHEKLAQLVAMLAQ
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Template Sequence  LIRLSVGLEDEEDLLEDLDQALKA
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   373......380.........390......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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