Job Description P21169 Confidence 99.39% Date Thu Jan 5 11:37:54 GMT 2012 Rank 215 Aligned Residues 296 % Identity 18% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																	.	.																																					.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																					.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	.	.	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	.	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.																																					.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																					.								.									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence		N	I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	K	K	V	F	F	S	N	S	G	T	E	A	I	E	A	S	I	K	V	V	K	N	T	G	R	K	Y	I	I	A	F	L	G	G	F	H	G	R	T	F	G	.	S	I	S	L	T	A	S	K	A	V	Q	R	S	I	V	G	P	F
Template Known Secondary structure																S	S		S	S								S	S														T	T	S								T	T					S	S			.							S		G	G	G	G		S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
								231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.					.
Predicted Secondary structure		.	.	.	.	.	.																									.	.	.	.	.	.																																	.	.						.	.	.	.
Query SS confidence		.	.	.	.	.	.																									.	.	.	.	.	.																																	.	.						.	.	.	.
Query Sequence		.	.	.	.	.	.	P	V	Y	L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	.	.	.	.	.	.	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	.	.	G	T	V	Y	N	.	.	.	.	A
Query Conservation		.	.	.	.	.	.																									.	.	.	.	.	.																																	.	.						.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.																.	.	.	.	.	.	.	.										.	.						.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V	N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	.	.	.	.	.	.	.	.	G	I	F	F	E	P	I	Q	G	E	G	G	Y	V	I	P	P	K	N	F	F
Template Known Secondary structure			T	T									S	S	S		T	T				T	T	T																T					T			G	G	G			.	.	.	.	.	.	.	.						S	S	B	T	T	T	T	S	B				T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C
Query Conservation
Alig confidence																													.	.	.														.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																													.	.	.														.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		A	E	L	Q	K	L	A	K	K	Y	G	I	L	L	V	D	D	E	V	Q	M	G	L	G	R	T	G	.	.	.	K	L	F	A	I	E	N	F	N	T	V	P	D	.	.	.	.	V	I	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	L	D	F	.	.	.	.	.	.	.
Template Known Secondary structure												T								T	T	T	T	T	T	T	T	S	.	.	.	S	S	S	G	G	G	G	G	T				S	.	.	.	.						G	G	G	G	T	T	T	S									G	G	G			.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.														.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	F	G	G	N	A	L	A	C	A	I	G	S	K	V	I	D	I	V	.	.	.	.	K	D	L	L	P	H	V	N	E	I	G	K	I	F	A	E	E	L	Q	G	L	A	D	D	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																			T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	A	W	G	L	E	Y	N	E	.	.	.	.	.	.	.	.	.	.	.	K	K	V	R	D	R	I	I	G	E	S	F	K	R	G	L	L	L	L	P	A	G	R	S	A	I	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S		.	.	.	.	.	.	.	.	.	.	.														T	T							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	355	.	.	.	.	360	.	.	.	.	.												.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F	E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	P	P	L	V	I	S	E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions