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Job DescriptionP21169
Confidence99.41%DateThu Jan 5 11:37:54 GMT 2012
Rank213Aligned Residues341
% Identity18%Templatec2e7uA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170......... 180.........190.........200
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Query Sequence  GHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVF. HADKTYFVLNGTSAANKVVTN
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Template Sequence  GHAH. . . . . . . . . . . . . . . . . . PKVLARVRE. TLERGLTFGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRL
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BT
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TT

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   67..70 ......... 80.........90.........100.........110.........120.......
 
   201.. ......210.........220.........230.........240.........250.. .......260.........270...
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Query Sequence  ALL. . TRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFIGGIDAHCF. . . . . NEEYLRQQIRDVAPEKADLPR
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Template Sequence  ARGYTGRPYIVKFRGNYHGHAD. GLLVEAG. SGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIA. . . .
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G.GGS

.SSS

B
SSTT

TT
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GGG....
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   128.130.........140......... 150...... ...160.........170.........180.........190.........200.
 
   274.....280..... .... 290.........300.........310.........320.........330.........340........
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Query Sequence  PYRLAIIQLGTY. . DGTV. . . YNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQ
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Template Sequence  . . . . AIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTG. FRLA. . . FGGATELLGLKPD. . . . LVTLGKILG
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SSB
TTS
B


GGGGT

TTTT.TTSS...TTT


S....
GGGG
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   202.......210.........220.........230.........240... .... ..250.........260 .........
 
   349350.........360.........370.........380.........390.........400.........410.........420........
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Query Sequence  QAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAIL
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Template Sequence  GGL. . PAAAYAGRREI. . . . . . . MEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEEN. . PGYYAYLEDLGARLEAGLK
Template Known Secondary structure  TTS..S

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TT
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   270.. .......280... ......290.........300.........310......... 320.........330........
 
   429430.........440.........450.........460.........470.........480.........490.........500........
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Query Sequence  ARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVP
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Template Sequence  EVLKEKGLPHTVNR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VGSMITVFFTEGPVVTFQDARRTDT
Template Known Secondary structure  TT


.........................................TTSSSS


STTS
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   339340.........350.. .......360.........370.......
 
   509510.........520.........530.........540.........550...
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Query Sequence  . . ATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQ
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Template Sequence  ELFKRFFHGLLDRGIYWPPSN. . FEAAFLSVAHREEDVEKTLEALRK
Template Known Secondary structure  TTT

SSS..SS


TT

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   378.380.........390........ .400.........410.........420..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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