Job Description P21169 Confidence 99.74% Date Thu Jan 5 11:37:54 GMT 2012 Rank 108 Aligned Residues 295 % Identity 16% Template c1ibjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana Resolution 2.30 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	.	.	.	.	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I
Query Conservation																																																										.	.	.	.
Alig confidence																								.									.																						.			.	.	.	.														.	.	.	.	.	.	.
Template Conservation																								.									.																						.																				.	.	.	.	.	.	.
Template Sequence		D	A	L	E	S	L	L	A	K	L	D	K	A	D	R	A	F	C	F	T	S	G	.	M	A	A	L	S	A	V	T	.	H	L	I	K	N	G	E	E	I	V	A	G	D	D	V	Y	G	G	S	D	R	.	L	L	S	Q	V	V	P	R	S	G	V	V	V	K	R	V	N	T	T	.	.	.	.	.	.	.
Template Known Secondary structure													T		S						S	S		.									.	T	T	S		T	T							T	T								.					T	G	G	G	G	T								T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.									.																						.																				.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	.	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A
Query Conservation																																										.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.								.																																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	L	D	E	V	A	A	A	I	G	P	Q	T	K	L	.	.	.	.	.	.	.	.	.	.	V	W	L	E	S	P	T	N	P	R	Q	Q	I	S	D	I	R	K	I	S	E	M	A	H	A	Q	G	A	L	V	L	V	D	N	S	I	M	S	P	V	L	S	R	P	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T				.	.	.	.	.	.	.	.	.	.					S	S		T	T	T															T	T	T								T	T	T		T	T	T			G	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
										206	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I
Query Conservation
Alig confidence		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	E	L	G	A	D	.	.	.	.	I	V	M	H	S	A	T	K	F	I	A	G	H	S	D	V	M	A	G	V	L	A	V	K	G	.	.	.	.	.	.	.	E	K	L	A	K	E	V	Y	F	L	Q	N	S	E	G	S	G	L	A	P	F	D	C	W	L	C	L	R	G	I	K	T
Template Known Secondary structure		.	.	.	.	.	.	G	G	G	T		S	.	.	.	.						T	T	T	T	T	T		S	S										S	S	.	.	.	.	.	.	.														T	T		B														T	T
Template Predicted Secondary structure		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
								265	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V
Query Conservation
Alig confidence						.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	L	R	.	.	.	.	.	I	E	K	Q	Q	E	N	A	R	K	I	A	M	Y	L	S	S	H	P	R	V	K	K	V	Y	Y	A	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	H	P	G	H	H	L	H	F	S	Q	A	K	G
Template Known Secondary structure						.	.	.	.	.																	T		T	T							T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T					T	T	S		S
Template Predicted Secondary structure						.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.						.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																												.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.																												.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	I	L	F	L	L	T
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	S	V	F	S	F	I	T	G	S	V	A	.	.	.	.	.	.	.	.	.	.	.	L	S	K	H	L	V	E	T	T	K	Y	F	S	I	A	V	S	F	G	S	V	K	S	L	I	S	M	P	C	F	M	S	H	A	S	I	P	A	E	V	R	E	A	R	G	L	T	E	D	L	V	R	I	S	A	G
Template Known Secondary structure				S							S				.	.	.	.	.	.	.	.	.	.	.										S	S	S				S				S	S	S						T	T	T	T	T	T	T	T			S	S	T	T	T	T	S	S			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.												.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	D	V	D	D	L	I	S	D	L	D	I	A	F	K	T	F
Template Known Secondary structure		S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions