Job Description P21169 Confidence 100.00% Date Thu Jan 5 11:37:54 GMT 2012 Rank 1 Aligned Residues 707 % Identity 54% Template c1c4kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ornithine decarboxylase); PDBTitle: ornithine decarboxylase mutant (gly121tyr) Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	M	N	I	A	A	S	S	E	L	V	S	R	L	S	S	H	R	R	V	V	A	L	G	D	T	D	F	T	D	V	A	A	V	V	I	T	A	A	D	S	R	S	G	I	L	A	L	L	K	R	T	G	F	H	L	P	V	F	L	Y	S	E	H	A	V	E	L	P	A	G	V	T	A	V	I	N	G	N
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		S	S	L	K	I	A	S	T	Q	E	A	R	Q	Y	F	D	T	D	R	V	V	V	D	A	V	G	S	D	F	T	D	V	G	A	V	I	A	M	.	.	D	Y	E	T	D	V	I	D	A	A	D	A	T	K	F	G	I	P	V	F	A	V	T	K	D	A	Q	A	I	S	A	D	E	L	K	K	I	F	H	I
Template Known Secondary structure										G	G	G	G	G	G					S	S					S	S	S		S	S	S								.	.	T	T										T	T		S									S		S	T	T	S						T	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		E	Q	Q	.	.	.	.	.	.	.	W	L	E	L	E	S	A	A	C	Q	Y	E	E	N	L	L	P	P	F	Y	D	T	L	T	Q	Y	V	E	M	G	N	S	T	F	A	C	P	G	H	Q	H	G	A	F	F	K	K	H	P	A	G	R	H	F	Y	D	F	F	G	E	N	V	F	R	A	D	M	C	N	A
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	L	E	F	D	A	T	V	N	A	R	E	I	E	T	A	V	N	N	Y	E	D	S	I	L	P	P	F	F	K	S	L	K	E	Y	V	S	R	Y	L	I	Q	F	D	C	P	G	H	Q	G	G	Q	Y	Y	R	K	H	P	A	G	R	E	F	Y	D	F	F	G	E	T	V	F	R	A	D	L	C	N	A
Template Known Secondary structure								S	T	T																	S												T	S						S	S	S	T	T	T	T	T	T	T	G	G	G	S												S					S				T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	L	G	D	L	L	I	H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	L	G	D	L	L	I	H	E	G	P	A	V	A	A	E	K	H	A	A	R	V	Y	N	A	D	K	T	Y	F	V	L	G	G	S	S	N	A	N	N	T	V	T	S	A	L	V	S	N	G	D	L	V	L	F	D	R	N	N	H	K	S	V	Y	N	S	A	L	A	M	A	G	G	R	P	V	Y	L
Template Known Secondary structure		S	G	G	G		B	T	T	T	T	B	T													T	T		S						S	S																T	T							T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	N	R	N	P	Y	G	F	I	G	G	I	Y	D	S	D	F	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	H	E	V	V	K	R	I	G	H	L	C	D	Y	I	E	F	D	S	A	W	V	G
Template Known Secondary structure							T	T								G	G	G	S									T	T	T	S	S					T		S			B	S						S	B		T	T	S													G	G	G	B	S							T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		315	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Y	E	Q	F	I	P	M	M	A	D	.	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		Y	E	Q	F	I	P	M	M	R	N	S	S	P	L	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D	H	K	H	F	N	N	S	F	N	L	F	M	S	T	S	P	F	Y	P	M
Template Known Secondary structure		G	G	G	S	S	G	G	G	G	G	G		T	T	S						T	T	S													S	S			T	T									G	G	G	T	T	S	T	T															S		S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	A	L	D	V	N	A	A	M	Q	E	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D	G	D	T	E	D	M	A	N	N	I	D	Y	W	R	F	E	K	G	A	K	W	H	A	Y
Template Known Secondary structure													S																									T	T		S	S			S	S		S			T	T			G	G	G	S						T	T		G	G	G	G	B			T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	S	D	L	N	S	I	L	F	L	M	T	P	A	E	T	P	A	K	M	N	N	L	I	T	Q	L	L	Q
Template Known Secondary structure		T	T			T	T						T	T							S	S			T	T	T	T				S	S														T	T				S				S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	H	I	E	D	D	S	P	L	V	E	V	L	P	S	V	Y	N	K	Y	P	V	R	Y	R	D	Y	T	L	R	Q	L	C	Q	E	M	H	D	L	Y	V	S	F	D	V	K	D	L	Q	K	A	M	F	R	Q	Q	S	F	P	S	V	V	M	N	P	Q	D	A	H	S	A	Y	I	R	G	D	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	L	I	E	E	D	A	P	L	K	Q	V	L	P	S	I	Y	A	A	N	E	E	R	Y	N	G	Y	T	I	R	E	L	C	Q	E	L	H	D	F	Y	K	N	N	N	T	F	T	Y	Q	K	R	L	F	L	R	E	F	F	P	E	Q	G	M	L	P	Y	E	A	R	Q	E	F	I	R	N	H	N	K
Template Known Secondary structure								T	T		B										T	T	S	T	T	T	S	T	T		B														T	T	T								T	T	S	G	G	G					S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	I	R	D	A	E	G	R	I	A	A	E	G	A	L	P	Y	P	P	G	V	L	C	V	V	P	G	E	V	W	G	G	A	V	Q	R	Y	F	L	A	L	E	E	G	V	N	L	L	P	G	F	S	P	E	L	Q	G	V	Y	S	E	T	D	A	D	G	V	K	R	L	Y	G	Y	V	L	K
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		L	V	P	L	N	K	I	E	G	E	I	A	L	E	G	A	L	P	Y	P	P	G	V	F	C	V	A	P	G	E	K	W	S	E	T	A	V	K	Y	F	T	I	L	Q	D	G	I	N	N	F	P	G	F	A	P	E	I	Q	G	V	Y	F	K	Q	E	G	D	K	.	V	V	A	Y	G	E	V	Y	D
Template Known Secondary structure					T	T	T		T	T	S	B	B	S	S		B			T	T	T		S		S	B		T	T																					S	T	T	S						S	S						T	T		.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.		710	.	.	.	.	.	.	.	.