Job Description P08997 Confidence 100.00% Date Thu Jan 5 11:01:45 GMT 2012 Rank 3 Aligned Residues 396 % Identity 21% Template d1n8ia_ SCOP info TIM beta/alpha-barrel Malate synthase G Malate synthase G Resolution 2.10

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		113	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.
Predicted Secondary structure														.																						.	.	.	.	.	.	.	.	.																																			.
Query SS confidence														.																						.	.	.	.	.	.	.	.	.																																			.
Query Sequence		V	F	M	A	D	F	E	D	S	L	A	P	.	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	.	.	.	.	.	.	.	.	.	Y	T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W	.	R	G
Query Conservation														.																						.	.	.	.	.	.	.	.	.																																			.
Alig confidence														.																						.	.	.	.	.	.	.	.	.												.																							.
Template Conservation																																																								.
Template Sequence		T	T	I	M	D	F	E	D	S	V	A	A	V	D	A	A	D	K	V	L	G	Y	R	N	W	L	G	L	N	K	G	D	L	A	A	R	V	L	N	R	D	R	N	Y	T	A	P	G	G	G	Q	F	T	L	.	P	G	R	S	L	M	F	V	R	N	V	G	H	L	M	T	N	D	A	I	V	D	T	D	G
Template Known Secondary structure							S	S	T	T					S																	T			B			B										T	T	S						.		S	S										S	S									T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		182	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																		.	.
Query SS confidence											.	.	.																		.	.
Query Sequence		E	A	I	P	G	S	L	F	D	.	.	.	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	.	.	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F
Query Conservation											.	.	.																		.	.
Alig confidence											.	.	.																		.	.
Template Conservation
Template Sequence		S	E	V	F	E	G	I	M	D	A	L	F	T	G	L	I	A	I	H	G	L	K	A	S	D	I	N	S	R	T	G	S	I	Y	I	V	K	P	K	M	H	G	P	A	E	V	A	F	T	C	E	L	F	S	R	V	E	D	V	L	G	L	P	Q	N	T	M	K	I	G	I	M	D	E	E	R	R	T	T	V
Template Known Secondary structure																			G	G	G	G	S							S	S	S								S			S																			T			T	T										S					T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S
Query Conservation
Alig confidence																																												.	.	.																			.	.	.	.													.
Template Conservation																																												.	.	.																			.	.	.	.													.
Template Sequence		N	L	K	A	C	I	K	A	A	A	D	R	V	V	F	I	N	T	G	F	L	D	R	T	G	D	E	I	H	T	S	M	E	A	G	P	M	V	R	K	G	T	.	.	.	M	K	S	Q	P	W	I	L	A	Y	E	D	H	N	V	D	A	G	.	.	.	.	L	A	A	G	F	S	G	R	A	Q	V	G	.
Template Known Secondary structure		T								T	T	T	T																			T	G	G	G			B			G	G	G	.	.	.	G	G	G	S															.	.	.	.			T	T		T	T	T	S				.
Template Predicted Secondary structure																																												.	.	.																			.	.	.	.													.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.				.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500					.	.	.	.	.	.	.	.	.	510	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.							.	.	.	.	410
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D	I	L	G	S	R	K	N	Q	L	E	V	M	R	E	Q	D	A	P	I	T	A	D	Q	L	.	.	.	.	.	.	L	A	P	C	D
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence																																																	.													.									.	.	.	.	.	.
Template Conservation																																																	.													.
Template Sequence		K	G	M	W	T	M	T	E	L	M	A	D	M	V	E	T	K	I	A	Q	P	R	A	G	A	S	T	A	W	V	P	S	P	T	A	A	T	L	H	A	L	H	Y	H	Q	V	D	.	V	A	A	V	Q	Q	G	L	A	G	K	R	.	R	A	T	I	E	Q	L	L	T	I	P	L	A	K	E	L	A	W	A
Template Known Secondary structure								T	T									T	T					T	T		S					S	S														S		.									T	T			.								T				B			T	T
Template Predicted Secondary structure																																																	.													.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.						.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																									.											.	.	.	.	.
Query SS confidence																									.											.	.	.	.	.
Query Sequence		G	E	R	T	E	E	G	M	R	A	N	I	R	V	A	V	Q	Y	I	E	A	W	I	.	S	G	N	G	C	V	P	I	Y	G	.	.	.	.	.	L	M	E	D	A	A	T	A	E	I	S	R	T	S	I	W	Q	W	I	H	H	Q	K	T	L	S	N	G	K	P	V	T	K	A	L	F	R	Q	M	L	G
Query Conservation																									.											.	.	.	.	.
Alig confidence																									.											.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		P	D	E	I	R	E	E	V	D	N	N	C	Q	S	I	L	G	Y	V	V	R	W	V	D	Q	G	V	G	C	S	K	V	P	D	I	H	D	V	A	L	M	E	D	R	A	T	L	R	I	S	S	Q	L	L	A	N	W	L	R	H	G	V	.	.	.	.	.	.	.	I	T	S	A	D	V	R	A	S	L	E
Template Known Secondary structure																													S							T	T																								T	T	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.								.	.	.	.	.	.	.	660	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	M	K	V	I	A	S	E	L	G	E	E	R	F	S	Q	G	R	F	D	D	A	A	R	L	M	E	Q	I	T	T	S	D	E	L	I	D	F	L	T	L	P	G	Y
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		R	M	A	P	L	V	D	R	Q	N	A	.	.	.	Y	R	P	M	A	P	N	F	D	D	S	I	A	F	L	A	A	Q	E	L	I	L	S	G	A	Q	Q	P	N	G	Y
Template Known Secondary structure													.	.	.						S		G	G	G													T	G	G	G	S	G	G	G
Template Predicted Secondary structure													.	.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.				.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.