Job Description P08997 Confidence 98.67% Date Thu Jan 5 11:01:45 GMT 2012 Rank 26 Aligned Residues 270 % Identity 12% Template d1h6za1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 3.00

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		90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																			.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	V	E	I	T	G	P	.	V	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	F	.	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	A	V	N	G	T	I	S	Y	T	N	E
Query Conservation										.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	L	G	V	R	T	N	A	D	T	P	A	D	A	A	K	A	R	S	F	G	A	E	G	V	G	L	C	R	T	E	H	M	F	F	E	G	S	R	I	N	F	I	R	E	M	I	L	A	D	S	A	S	G	R	K	A	A	L	D	K	L	L	P	I	Q	R	A	D	F	V	G	I	L	R	A	M	R	G
Template Known Secondary structure				S							S	S									T	T	T			S					B		S	G	G	G	S	T	T	T										S		S	S																								T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	V	P	H	D	A	A	A	Q	F	E	L	A	Q	K	L	G	M	P	A	E	K	V	R	N	R	V	N	A	L	H	E	L	N	P	M	L	G	H	R	G	C	R	L	G	I	T	Y	P	E	I	Y	N	M	Q	V	R	A	I	I	E	A	A	I	A	V
Template Known Secondary structure		S									S		G	G	G	G			S	S		S	S	T	T	T	T	S		S	S	S												S	S			S	S	S	T	T	S	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
										209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	.	.	.	N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W
Query Conservation		.	.	.	.	.	.	.	.																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.																													.	.	.																											.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		S	E	E	G	S	S	V	I	P	E	I	M	V	P	L	V	G	K	K	E	E	L	S	L	I	R	E	E	V	V	K	T	A	E	A	V	I	T	K	S	G	K	R	V	H	Y	T	V	G	T	M	I	E	V	P	R	A	A	V	T	A	D	S	I	A	.	.	.	.	Q	K	A	D	F	F	S	F	G	T	N
Template Known Secondary structure			T	T	T														S																						S		S												S						T					T	.	.	.	.	T	T		S						T	T
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.					.	.	.	.	.	.	.	.	790	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	.	.	.	.	.	.	.	.	.	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	.	.	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L
Query Conservation																														.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																														.	.	.	.	.	.	.	.	.																		.	.			.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		D	L	T	Q	M	G	C	G	F	S	R	D	D	A	G	P	F	L	R	H	Y	G	N	L	G	I	Y	A	Q	D	P	F	Q	S	I	D	Q	E	G	I	G	E	L	V	R	I	A	V	T	K	G	R	R	V	K	P	M	L	.	.	.	.	.	.	.	K	M	G	I	C	G	E	H	G	G	D	P	A	T	I
Template Known Secondary structure									T			G	G	G						T	T	T	T	T	T		S	S	S	S		T	T	T	S			T	T	T																S	T	T		.	.	.	.	.	.	.						S	G	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850								.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.										.
Template Conservation							.	.	.	.	.	.	.										.
Template Sequence		G	F	C	H	K	.	.	.	.	.	.	.	V	G	L	D	Y	V	S	C	S	.	P	F	R	V	P	V	A	I	V	A
Template Known Secondary structure							.	.	.	.	.	.	.		T		S						.	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.										.
Template SS confidence
		866	.	.	.	870								.	.	.	.	.	.	.	.	.		880	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions