Job Description P08997 Confidence 100.00% Date Thu Jan 5 11:01:45 GMT 2012 Rank 6 Aligned Residues 274 % Identity 17% Template c3r4iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of a citrate lyase (bxe_b2899) from burkholderia2 xenovorans lb400 at 2.24 a resolution Resolution 2.24 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		V	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	.	.	.	.	.	F	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	Y	T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.													.	.																	.	.																							.	.	.	.	.
Template Conservation																																			.	.																	.	.																							.	.	.	.	.
Template Sequence		G	S	E	K	L	X	L	K	S	L	A	L	Q	Q	Q	L	G	P	V	F	D	I	T	L	D	C	E	D	G	A	Q	V	G	.	.	R	E	A	Q	H	A	E	L	V	A	S	L	L	G	S	E	.	.	H	D	R	F	G	R	V	G	V	R	I	H	D	F	D	H	A	H	W	R	D	D	.	.	.	.	.
Template Known Secondary structure			S																T	T							S	S	T	T	S		S	S	.	.													T	T	S	S	.	.	S			S	S									T	T	S	T	T					.	.	.	.	.
Template Predicted Secondary structure																																			.	.																	.	.																							.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	.	.	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	R	G	T	I	K	A	T	L	L	I	E
Query Conservation																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	L	I	L	R	A	A	K	R	A	P	A	Y	I	T	L	P	K	I	R	H	V	H	D	A	A	E	X	V	A	F	I	E	A	T	R	R	E	L	G	I	A	.	Q	P	V	P	V	Q	L	L	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S			S									S																		T	T		S	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template SS confidence
																												99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M
Query Conservation
Alig confidence														.	.																													.	.	.	.	.																																	.
Template Conservation														.	.																													.	.	.	.	.																																	.
Template Sequence		T	H	G	A	L	T	R	V	F	D	L	A	.	.	A	L	P	G	V	E	A	L	S	F	G	L	X	D	F	V	S	A	H	D	G	A	I	P	D	T	A	X	.	.	.	.	.	R	S	P	G	Q	F	D	H	P	L	V	R	R	A	K	L	E	I	S	A	A	C	H	A	Y	G	K	V	P	S	H	N	.
Template Known Secondary structure		S						T						.	.	T		T	T														T	T	T	T	S	S		G	G	G	G	.	.	.	.	.	S	T	T					S																	T	T							.
Template Predicted Secondary structure														.	.																													.	.	.	.	.																																	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	.	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D	I	L	G	S	R	K	N	Q	L	E	V	M	R	E	Q	D	A	P	I	T	A	D	Q	L	L	A	P	C
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	S	T	E	V	R	D	X	S	V	V	A	N	D	A	A	R	A	R	N	E	F	G	Y	T	R	X	W	S	I	H	P	A	Q	I	E	A	I	V	A	A	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.					S	S															T	T			S					S	S											T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	R	T	E	E	G	M	R	A	N	I	R	V	A	V	Q	Y	I	E	A	W	I	S	G	N	G	C	V	P	I	Y	G	L	M	E	D	A	A	T	A	E	I	S	R	T	S	I
Query Conservation
Alig confidence		.	.	.	.																			.	.	.
Template Conservation		.	.	.	.																			.	.	.
Template Sequence		.	.	.	.	R	D	E	E	I	T	T	A	T	E	I	L	L	A	A	Q	S	A	.	.	.	Q	W	G	P	T	R	Y	H	D	T	L	H	D	R	A	S	Y	R	Y	Y	W	S	V	L
Template Known Secondary structure		.	.	.	.		T																T	.	.	.	T	T	S					T	T
Template Predicted Secondary structure		.	.	.	.																			.	.	.
Template SS confidence
						268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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