Job Description P08997 Confidence 100.00% Date Thu Jan 5 11:01:45 GMT 2012 Rank 7 Aligned Residues 275 % Identity 15% Template c3qqwC_ PDB info PDB header:lyase Chain: C: PDB Molecule:putative citrate lyase; PDBTitle: crystal structure of a hypothetical lyase (reut_b4148) from ralstonia2 eutropha jmp134 at 2.44 a resolution Resolution 2.44 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		S	I	R	D	A	D	W	K	I	R	G	I	P	A	D	L	E	D	R	R	V	E	I	T	G	P	V	E	R	K	M	V	I	N	A	L	N	A	N	V	K	.	.	.	.	.	V	F	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	Y
Query Conservation																																											.	.	.	.	.
Alig confidence																			.	.						.																	.	.	.	.	.														.	.																	.	.
Template Conservation																			.	.						.																																			.	.																	.	.
Template Sequence		H	P	N	D	A	L	F	A	G	E	K	S	F	P	V	L	A	.	.	A	C	E	H	F	.	A	G	S	E	K	L	I	G	K	A	X	D	L	Q	V	E	Y	G	P	V	F	D	V	T	C	D	C	E	D	G	A	A	A	G	.	.	Q	E	R	E	H	A	E	X	V	A	R	X	I	A	S	D	.	.	R
Template Known Secondary structure										S	S								.	.	S					.			S																S	S							S	T	T	T	S		T	T	.	.															S	T	.	.	T
Template Predicted Secondary structure																			.	.						.																																			.	.																	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	.	.	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W
Query Conservation																																																												.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	H	G	R	A	G	A	R	I	H	D	P	S	H	P	A	W	R	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	I	V	N	G	A	G	G	R	L	A	Y	I	T	V	P	K	A	T	N	S	G	Q	V	A	E
Template Known Secondary structure				S										T	T	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T												S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D
Query Conservation
Alig confidence																	.																							.	.																													.	.	.	.	.
Template Conservation																	.																							.	.																													.	.	.	.	.
Template Sequence		V	I	R	Y	I	G	D	V	A	K	R	A	G	L	D	.	K	P	V	P	V	H	V	L	I	E	T	H	G	A	L	R	D	V	F	Q	I	A	.	.	E	L	P	N	I	E	V	L	D	F	G	L	X	D	F	V	S	G	H	H	G	A	I	P	A	A	A	X	.	.	.	.	.	R	S	P	G	Q	F	E
Template Known Secondary structure													T	T		S	.	S										S						T					T	.	.	T	S	T	T														T	T	T	T		S		G	G	G	G	.	.	.	.	.	S	T	T	G	G	G	T
Template Predicted Secondary structure																	.																							.	.																													.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	.	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D	I	L
Query Conservation																																																						.
Alig confidence																											.	.	.	.	.	.	.	.	.																			.																										.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		H	A	L	L	V	R	A	K	A	D	X	V	A	A	A	L	A	N	G	I	V	P	A	H	N	.	.	.	.	.	.	.	.	.	V	C	L	N	L	K	D	A	E	V	I	A	S	D	A	C	R	A	R	N	E	F	G	F	L	R	X	W	S	I	Y	P	A	Q	I	Q	P	I	V	N	A	X	R	P	.	.
Template Known Secondary structure		S																	T	T							.	.	.	.	.	.	.	.	.			S		S	S																T								S	S	G	G	G									S		.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	K	N	Q	L	E	V	M	R	E	Q	D	A	P	I	T	A	D	Q	L	L	A	P	C	D	G	E	R	T	E	E	G	M	R	A	N	I	R	V	A	V	Q	Y	I	E	A	W	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	T	E	V	E	D	A	A	G	I	L	V	A	A	T	Y	R	Y	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions