Return to main results Retrieve Phyre Job Id

Job DescriptionP08997
Confidence97.97%DateThu Jan 5 11:01:45 GMT 2012
Rank38Aligned Residues142
% Identity18%Templatec3ma8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum
Resolution2.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  NYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRW
Query Conservation      
        
 





  

     

   
   

  


 
  




 

 
  


 
 
 

 

 

  
Alig confidence 


































































....








Template Conservation 

  

    

 






   

   
  
   
           





   

 





  ....








Template Sequence  DIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE. . . . SDGIMVARG
Template Known Secondary structure  TTTTTTT
S
S

S

TTTTT





ST....SS
Template Predicted Secondary structure 























....



Template SS confidence 















































































   228.230.........240.........250.........260.........270.........280.........290.... .....300...
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  DYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEA
Query Conservation 

 



         


 
         
 
    

 






 






  
  
      
   

 
   
 
Alig confidence 





....................
























...

























Template Conservation 





....................  
 

  

 

  
   





...







   
 












Template Sequence  DLGMEI. . . . . . . . . . . . . . . . . . . . PPEKIFVAQKCMISKCNVAGKPVVT. . . ATQMLESMIKSNRPTRAEMTDVANAV
Template Known Secondary structure  S....................
T

...SSSSGGGGTSSS

Template Predicted Secondary structure 





....................




...





Template SS confidence 















































































   304..... 310.........320.........330.... .....340.........350.........360
 
   358.360......
Predicted Secondary structure 




Query SS confidence 








Query Sequence  NNGHDGTWI
Query Conservation   





 
Alig confidence 








Template Conservation   

 




Template Sequence  LDGSDCVML
Template Known Secondary structure  T
S
Template Predicted Secondary structure 


Template SS confidence 








   361........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions