Job Description P08997 Confidence 98.26% Date Thu Jan 5 11:01:45 GMT 2012 Rank 32 Aligned Residues 172 % Identity 20% Template c3khdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pff1300w. Resolution 2.70 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure															.	.	.					.	.
Query SS confidence															.	.	.					.	.
Query Sequence		G	I	P	A	D	L	E	D	R	R	V	E	I	.	.	.	T	G	P	V	.	.	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	F	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	Y	T	N	E	A	G	K	I	Y	Q	L
Query Conservation															.	.	.					.	.
Alig confidence															.	.	.					.	.																										.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	N	V	N	L	R	S	K	K	T	H	I	V	C	T	L	G	P	A	C	K	S	V	E	T	L	V	K	L	I	D	A	G	M	D	I	C	R	F	N	F	S	H	G	S	H	.	.	.	E	D	H	K	E	M	F	N	N	V	L	K	A	Q	E	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G		S	S								T	T	S		S										T									T	T	S	S			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	C	L	L	G	M	L	L	D	T	K	E	K	D	K	N	D	I	L	N	F	A	I	P	M	G	C	N	F	I	A	A	S	F	I	Q	S	A	D	D	V	R	L	I	R	N	L	L	G	P	R	G	R	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													S	S					T	T					T		S						S			S	T	T										T	T	T	T	S	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Template SS confidence
																										102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I
Query Conservation
Alig confidence		.	.	.	.	.																								.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation		.	.	.	.	.																								.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		.	.	.	.	.	H	I	K	I	I	P	K	I	E	N	I	E	G	I	I	H	F	D	K	I	L	A	E	.	.	.	.	S	D	G	I	M	I	A	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	P	.	E	K	V	F	L	A	Q	K	L	M	I
Template Known Secondary structure		.	.	.	.	.	S	S								S						T								.	.	.	.	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	T	T
Template Predicted Secondary structure		.	.	.	.	.																								.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
							258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290																							.	.	.	.		.	.	.	.	.	300	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	C	H	K	R	G	A	F	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	C	N	L	Q	G	K	P	I	I
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions