Return to main results Retrieve Phyre Job Id

Job DescriptionP08997
Confidence97.84%DateThu Jan 5 11:01:45 GMT 2012
Rank41Aligned Residues126
% Identity19%Templatec3e0vB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from leishmania mexicana in2 complex with sulphate ions
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230.........240.........250.........260.........270.........280......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  SGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKT
Query Conservation      
 





  

     

   
   

  


 
  




 

 
  


 
 
 

 

 

  

 



  
Alig confidence 



























.......






















....















..
Template Conservation   

 

 



   

  

  
   
 .......   





   

 

 


  ....













  ..
Template Sequence  GVDMIFASFIRSAEQVGDVRKALGPKGR. . . . . . . DIMIICKIENHQGVQNIDSIIEE. . . . SDGIMVARGDLGVEIP. .
Template Known Secondary structure  T
S
S



GGGT.......TS
STT....SS
TTTS
..
Template Predicted Secondary structure 










.......




....










..
Template SS confidence 















































































   204.....210.........220.........230. ........240.........250.... .....260.........270
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  LKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWI
Query Conservation         


 
         
 
    

 






 






  
  
      
   

 
   
  





 
Alig confidence  ..................























...


































Template Conservation  .................. 
 

  

 

  
   





...







  

 












 

 




Template Sequence  . . . . . . . . . . . . . . . . . . AEKVVVAQKILISKCNVAGKPVIC. . . ATQMLESMTYNPRPTRAEVSDVANAVFNGADCVML
Template Known Secondary structure  ..................T

...
SSSSGGGGT
SS

T
S
Template Predicted Secondary structure  ..................



...









Template SS confidence 















































































   271........280.........290.... .....300.........310.........320.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions