Job Description P08997 Confidence 100.00% Date Thu Jan 5 11:01:45 GMT 2012 Rank 2 Aligned Residues 499 % Identity 55% Template c3cuxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.70 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	T	R	P	Y	G	E	Q	E	K	Q	I	L	T	A	E	A	V	E	F	L	T	E	L	V	T	H	F	T	P	Q	R	N	K	L	L	A	A	R	I	Q	Q	Q	Q	D	I	D	N	G	T	L	P	D	F	I	S	E	T	A	S	I	R	D	A	D	W	K	I	R	G	I	P	A	D	L	E	D	R
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		V	T	L	V	G	E	.	.	M	A	Y	N	E	I	L	T	P	E	A	L	S	F	L	K	E	L	H	E	N	F	N	E	R	R	I	E	L	L	Q	K	R	M	K	K	Q	Q	K	I	D	A	G	E	F	P	K	F	L	E	E	T	K	R	I	R	E	A	D	W	T	I	A	K	L	P	K	D	L	E	D	R
Template Known Secondary structure						S		.	.			G	G	G	T	S																																			T	T							S	T	T						S									G	G	G	S
Template Predicted Secondary structure								.	.
Template SS confidence
		8	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	E	I	T	G	P	V	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	F	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	Y	T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	E	I	T	G	P	V	D	R	K	M	V	I	N	A	L	N	S	G	A	H	L	F	M	A	D	F	E	D	S	N	S	P	T	W	E	N	A	I	E	G	Q	I	N	L	R	D	A	V	K	G	T	I	S	H	K	N	E	N	G	K	E	Y	R	L	N	S	K	T	A	V	L	I	V	R	P	R	G	W
Template Known Secondary structure		S							S										T	S	S		S						S	S	T	T	S																				T							T	T	S							S	S											T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	R	G	T	I	K	A	T	L	L	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	E	E	K	H	M	Q	V	D	G	K	N	M	S	G	S	L	V	D	F	G	L	Y	F	F	H	N	A	K	A	L	L	E	K	G	S	G	P	Y	F	Y	L	P	K	M	E	S	Y	L	E	A	R	L	W	N	D	V	F	V	F	A	Q	K	Y	I	G	I	P	N	G	T	I	K	A	T	V	L	L	E
Template Known Secondary structure		T									T	T																								T	T												S																			T			T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		T	I	H	A	S	F	E	M	D	E	I	L	Y	E	L	K	D	H	S	A	G	L	N	C	G	R	W	D	Y	I	F	S	F	L	K	A	F	R	N	H	N	E	F	L	L	P	D	R	A	Q	V	T	M	T	A	P	F	M	R	A	Y	S	L	K	V	I	Q	T	C	H	R	R	N	A	P	A	I	G	E	.
Template Known Secondary structure		S					T	S								T	G	G	G								S											T	T	T		T	T						G	G	G			T	T	S																	T	T							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D	I	L	G	S	R	K	N	Q	L	E	V	M	R	E	Q	D	A	P	I	T	A	D	Q	L	L	A	P	C	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	R	A	D	K	E	R	E	A	L	D	G	H	D	G	T	W	V	A	H	P	G	L	V	P	V	A	M	E	V	F	N	H	I	.	M	K	T	P	N	Q	I	F	R	K	R	E	.	E	I	H	V	T	E	K	D	L	L	E	V	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		S	B				S	S	G	G	G												.			S	S			T	T				T	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.													.
Template SS confidence
																			346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	E	R	T	E	E	G	M	R	A	N	I	R	V	A	V	Q	Y	I	E	A	W	I	S	G	N	G	C	V	P	I	Y	G	L	M	E	D	A	A	T	A	E	I	S	R	T	S	I	W	Q	W	I	H	H	Q	K	T	.	L	S	N	G	K	P	V	T	K	A	L	F	R	Q	M	L	G	E	E	M	K	V
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		G	T	I	T	E	E	G	L	R	M	N	I	S	V	G	I	Q	Y	I	A	S	W	L	S	G	R	G	A	A	P	I	Y	N	L	M	E	D	A	A	T	A	E	I	S	R	A	Q	V	W	Q	W	I	R	H	E	G	G	K	L	N	D	G	R	N	I	T	L	E	L	M	E	E	L	K	E	E	E	L	A	K
Template Known Secondary structure																									T	T			S				T	T																						T	T		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	E	L	G	E	E	R	F	S	Q	G	R	F	D	D	A	A	R	L	M	E	Q	I	T	T	S	D	E	L	I	D	F	L	T	L	P	G	Y	R	L	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	E	R	E	I	G	K	E	.	A	K	K	G	R	F	Q	E	A	T	T	L	F	T	N	L	V	R	N	D	E	F	V	P	F	L	T	L	P	G	Y	E	I	L
Template Known Secondary structure								S		.				S																T	T			S		T
Template Predicted Secondary structure										.
Template SS confidence
		487	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.