Return to main results Retrieve Phyre Job Id

Job DescriptionP08997
Confidence98.07%DateThu Jan 5 11:01:45 GMT 2012
Rank35Aligned Residues118
% Identity19%Templatec1e0tD_
PDB info PDB header:phosphotransferaseChain: D: PDB Molecule:pyruvate kinase; PDBTitle: r292d mutant of e. coli pyruvate kinase
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230.........240.........250.........260.........270.........280......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  SGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKT
Query Conservation      
 





  

     

   
   

  


 
  




 

 
  


 
 
 

 

 

  

 



  
Alig confidence 




























......






















....















..
Template Conservation   

 

 



 
 

   
  
      ......   





   

 

 


  ....













  ..
Template Sequence  GVDFVAASFIRKRSDVIEIREHLKAHGGE. . . . . . NIHIISKIENQEGLNNFDEILEA. . . . SDGIMVARGDLGVEIP. .
Template Known Secondary structure  T
SSS

ST
T......T

ST....SSS
..
Template Predicted Secondary structure 











......




....










..
Template SS confidence 















































































   185....190.........200.........210... ......220.........230...... ...240.........250..
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  LKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWI
Query Conservation         


 
         
 
    

 






 






  
  
      
   

 
   
  





 
Alig confidence  ..................























..






..........


















Template Conservation  .................. 
 

  

 

  
   





..






..........


 





 

 




Template Sequence  . . . . . . . . . . . . . . . . . . VEEVIFAQKMMIEKCIRARKVVIT. . ATMRPTD. . . . . . . . . . AEAGDVANAILDGTDAVML
Template Known Secondary structure  ..................TT
..




..........TT
S
Template Predicted Secondary structure  ..................



..






..........



Template SS confidence 















































































   253......260.........270...... ...280... ......290.........300..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions