Job Description P08997 Confidence 98.27% Date Thu Jan 5 11:01:45 GMT 2012 Rank 31 Aligned Residues 251 % Identity 18% Template c1aqfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate Resolution 2.70 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.	.					.	.																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.					.	.																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	R	G	I	P	A	D	L	E	D	R	R	V	E	I	.	.	.	T	G	P	V	.	.	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	F	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.					.	.																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.					.	.																										.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.
Template Sequence		R	L	D	I	D	S	A	P	I	T	A	R	N	T	G	I	I	C	T	I	G	P	A	S	R	S	V	E	T	L	K	E	M	I	K	S	G	M	N	V	A	R	M	N	F	S	H	G	T	H	.	.	.	E	Y	H	A	E	T	I	K	N	V	R	T	A	T	E	S	F	A	S	D	P	I	L	Y	R	P	V
Template Known Secondary structure		T			S	S	S				S				S								T	T	S		S											T								T	T	S				.	.	.															G	G	G	T	T		T	T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
					144	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																.
Query SS confidence		.	.	.											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																.
Query Sequence		.	.	.	I	S	Y	T	N	E	A	G	K	I	.	.	.	.	.	.	.	.	.	.	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	.	.	.	.	.	.	.	.	.	L	H	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	.
Query Conservation		.	.	.											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		A	V	A	L	D	T	K	G	P	E	I	R	T	G	L	I	K	G	S	G	T	A	E	V	E	L	K	K	G	A	T	L	K	I	T	L	D	N	A	Y	M	E	K	C	D	E	N	I	L	W	L	D	Y	K	N	I	C	K	V	V	D	V	G	S	K	V	Y	V	D	D	G	L	I	S	L	Q	V	K	Q	K
Template Known Secondary structure													B	B			B	T	T	B	S	S				B			T	T									G	G	G	S	S		B	B	T	T				B	S		T	T							T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
																																											201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		G	P	D	F	L	V	T	E	V	E	N	G	G	F	L	G	S	K	K	G	V	N	L	P	G	A	A	V	D	L	P	A	V	S	E	K	D	I	Q	D	L	K	F	G	V	E	Q	D	V	D	M	V	F	A	S	F	I	R	K	A	A	D	V	H	E	V	R	K	I	L	G	E	K	.	.	.	.	.	.	.
Template Known Secondary structure			S	S								S			B			S	S		B				T	T							S	S														T	T		S									S												T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C
Query Conservation
Alig confidence																											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	N	I	K	I	I	S	K	I	E	N	H	E	G	V	R	R	F	D	E	I	L	E	A	.	.	.	.	S	D	G	I	M	V	A	R	G	D	L	G	I	E	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	K	V	F	L	A	Q	K	M	I	I	G	R	C
Template Known Secondary structure			S	S	S								S						T								.	.	.	.		S													S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		N	R	A	G	K	P	V	I	C	.	.	.	A	T	Q	M	L	E	S	M	I	K	K	P	R	P	T	R	A	E	G	S	D	V	A	N	A	V	L	D	G	A	D	C	I	M	L
Template Known Secondary structure					T						.	.	.		S	S	T	T	G	G	G	G	T	S	S	S																T		S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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