Return to main results Retrieve Phyre Job Id

Job DescriptionP0A998
Confidence100.00%DateThu Jan 5 11:09:42 GMT 2012
Rank2Aligned Residues163
% Identity42%Templatec3bvkC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEY
Query Conservation 
        

  
  

 

  

  
         
 
  
   
 

  

  
  

  


      
  
    
Alig confidence 















































































Template Conservation           

  
  

 

  

  
         
 
  
   
 

  

      
  


      
  
    
Template Sequence  MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKF
Template Known Secondary structure  SS
TT
TT














Template Predicted Secondary structure 























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 









Query SS confidence 















































































Query Sequence  SSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
Query Conservation        
   
  
  
      
   
    
  
  

  

 

 
    
   
  
        
    
  
  
Alig confidence 















































































Template Conservation        
  

  
         
   
    
  
  


 

 

 
    
   
  
      
    
 
  
  
Template Sequence  EGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG
Template Known Secondary structure  S
TT
T
STTT
Template Predicted Secondary structure 








Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LDT
Query Conservation     
Alig confidence 


Template Conservation     
Template Sequence  IAK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   161..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions