Job Description P0A998 Confidence 99.79% Date Thu Jan 5 11:09:42 GMT 2012 Rank 42 Aligned Residues 135 % Identity 15% Template c2vxxB_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:starvation induced dna binding protein; PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.
Query Sequence		P	E	M	I	E	K	L	N	E	Q	M	N	L	E	L	Y	S	S	L	L	Y	Q	Q	M	S	A	W	C	S	Y	H	T	F	E	G	A	A	A	F	L	R	R	H	A	Q	E	E	M	T	H	M	Q	R	L	F	D	Y	L	T	D	T	G	N	L	P	R	I	.	.	.	.	.	.	.	.	N	T	V	E	S
Query Conservation																																																																					.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	I	C	E	G	M	N	R	L	L	A	S	F	Q	A	L	Y	L	Q	Y	Q	K	H	H	F	V	V	E	G	A	E	F	Y	P	L	H	Q	F	F	Q	D	C	Y	E	Q	V	Q	D	H	V	H	A	L	G	E	R	L	N	G	L	G	G	V	P	V	A	G	F	Q	Q	L	A	A	L	C	C	F	T	P
Template Known Secondary structure																															S	T	T																													T	T						S									S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	A	E	Y	S	S	L	D	E	L	F	Q	E	T	Y	K	H	E	Q	L	I	T	Q	K	I	N	E	L	A	H	A	A	M	T	N	Q	D	Y	P	T	F	N	F	L	Q	W	Y	V	S	E	Q	H	E	E	E	K	L	F	K	S	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	E	G	A	F	N	C	R	Q	M	L	S	N	D	L	Q	A	E	Q	A	I	I	G	V	L	R	Q	Q	A	T	Q	A	E	S	L	G	D	R	A	T	A	Y	L	Y	D	Q	I	L	L	K	T	E	E	R	A	Y	H	I	G	H	F	L
Template Known Secondary structure				S	S																																	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions