Job Description P0A998 Confidence 99.40% Date Thu Jan 5 11:09:42 GMT 2012 Rank 66 Aligned Residues 135 % Identity 13% Template c2pybC_ PDB info PDB header:metal transport Chain: C: PDB Molecule:neutrophil activating protein; PDBTitle: napa protein from borrelia burgdorferi Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		P	E	M	I	E	K	L	N	E	Q	M	N	L	E	L	Y	S	S	L	L	Y	Q	Q	M	S	A	W	C	S	Y	H	T	F	E	G	A	A	A	F	L	R	R	H	A	Q	E	E	M	T	H	M	Q	R	L	F	D	Y	L	T	D	T	G	N	L	P	R	I	N	T	V	E	S	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	Q	L	K	L	Q	E	L	L	A	S	L	H	I	F	Y	S	N	L	R	G	I	H	W	N	I	K	D	T	N	F	F	V	I	H	K	K	T	Q	K	L	Y	E	Y	I	E	K	I	I	D	I	V	A	E	R	S	R	M	L	G	Y	D	S	E	F	R	Y	S	E	F	M	K	K	S	F	I	K	E
Template Known Secondary structure																																S	S	T												T	T	T															T							S	T	T	T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	F	A	E	Y	S	S	L	D	E	L	F	Q	E	T	Y	K	H	E	Q	L	I	T	Q	K	I	N	E	L	A	H	A	A	M	T	N	Q	D	Y	P	T	F	N	F	L	Q	W	Y	V	S	E	Q	H	E	E	E	K	L	F	K	S	I	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	D	I	E	S	T	S	N	F	L	P	S	M	E	S	I	V	C	S	L	T	E	I	L	K	N	I	F	G	M	R	K	L	I	D	T	A	G	D	Y	G	T	A	N	I	M	D	D	I	M	S	D	L	E	K	H	L	W	M	H	K	A	L	L
Template Known Secondary structure				S		S	S	S				S	S			T	T	S	T	T																			T																							T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions