Phyre 2 alignment of P0AB77 with d2f8ja1

Job Description P0AB77
Confidence 99.95% Date Thu Jan 5 11:14:48 GMT 2012

Rank 184 Aligned Residues 316

% Identity 11% Template d2f8ja1

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 2.40

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	39	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure													.																																																.
Query SS confidence													.																																																.
Query Sequence	A	D	G	S	H	V	I	N	F	C	A	N	.	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	.	A	F	L	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G
Query Conservation													.																																																.
Alig confidence													.						.	.																								.	.	.															.
Template Conservation																			.	.																								.	.	.
Template Sequence	T	E	K	R	D	K	T	Y	L	A	L	N	E	N	P	F	P	F	.	.	P	E	D	L	V	D	E	V	F	R	R	L	N	S	D	A	L	R	I	Y	Y	D	S	.	.	.	P	D	E	E	L	I	E	K	I	L	S	Y	L	D	T	D	F	L	S	K	N	N	V	S	V	G	N	G	A	D	E	I	I	Y
Template Known Secondary structure						S				S	S				S	S			.	.														T	T	G	G	G	S				S	.	.	.	S													T		S	S			G	G	G
Template Predicted Secondary structure																			.	.																								.	.	.
Template SS confidence
	16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	L	F	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	G	V
Query Conservation
Alig confidence						.	.	.	.																																						.	.	.	.	.	.
Template Conservation						.	.	.	.																																						.	.	.	.	.	.
Template Sequence	V	M	M	L	M	.	.	.	.	F	D	R	S	V	F	F	P	P	T	Y	S	C	Y	R	I	F	A	K	A	V	G	A	K	F	L	E	V	P	L	T	K	D	L	R	I	P	.	.	.	.	.	.	E	V	N	V	G	E	G	D	V	V	F	I	P	N	P	N	N	P	T	G	H	V	F	E	R	E	E	I
Template Known Secondary structure						.	.	.	.	S	S						S	S													T										T	T	S				.	.	.	.	.	.						T	T							S	S		T	T	T
Template Predicted Secondary structure						.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
	91	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

	197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S
Query Conservation
Alig confidence					.																															.	.	.																																										.
Template Conservation					.																															.	.	.																																										.
Template Sequence	E	R	I	L	.	K	T	G	A	F	V	A	L	D	E	A	Y	Y	E	F	H	G	E	S	Y	V	D	F	L	K	K	Y	E	N	L	.	.	.	A	V	I	R	T	F	S	K	A	F	S	L	A	A	Q	R	V	G	Y	V	V	A	S	E	K	F	I	D	A	Y	N	R	V	R	L	P	F	N	V	S	Y	.
Template Known Secondary structure					.	T	T	T								T	T	G	G	G	T					G	G	G	G	G	T		S	S		.	.	.						S	T	T	T	S	S		T	T	T																			S		T	T		S			.
Template Predicted Secondary structure					.																															.	.	.																																										.
Template SS confidence
	161	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F
Query Conservation
Alig confidence	.	.	.																																																								.
Template Conservation	.	.	.																																																								.
Template Sequence	.	.	.	V	S	Q	M	F	A	K	V	A	L	D	H	R	E	I	F	E	E	R	T	K	F	I	V	E	E	R	E	R	M	K	S	A	L	R	E	M	G	Y	R	I	T	D	S	R	G	N	F	V	F	V	F	M	E	K	.	E	E	K	E	R	L	L	E	H	L	R	T	K	N	V	A	V	R	S	F	R
Template Known Secondary structure	.	.	.												T																										T								S	S									.													T	T							T
Template Predicted Secondary structure	.	.	.																																																								.
Template SS confidence
				236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

	357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.									.	.	.
Template Conservation	.	.	.	.	.	.	.	.									.	.	.
Template Sequence	.	.	.	.	.	.	.	.	E	G	V	R	I	T	I	G	.	.	.	K	R	E	E	N	D	M	I	L	R	E	L	E	V
Template Known Secondary structure	.	.	.	.	.	.	.	.	T								.	.	.
Template Predicted Secondary structure	.	.	.	.	.	.	.	.									.	.	.
Template SS confidence
									312	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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