Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 42 Aligned Residues 335 % Identity 19% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	.	.	.	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G
Query Conservation																											.	.	.
Alig confidence																											.	.	.						.																					.	.	.	.	.	.	.
Template Conservation																																			.																					.	.	.	.	.	.	.
Template Sequence		P	I	V	F	D	H	V	K	G	A	H	I	W	D	V	D	G	N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	.	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	.	.	.	.	.	.	.	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P
Template Known Secondary structure										B	T					T	T							S	S	T	T	T	T	T		T	T		.	B	T													T	T		S			.	.	.	.	.	.	.	S	S																	S
Template Predicted Secondary structure																																			.																					.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		102		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure			.																						.	.	.
Query SS confidence			.																						.	.	.
Query Sequence		M	.	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L
Query Conservation			.																						.	.	.
Alig confidence			.																						.	.	.																	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	G	H	A	.	.	.	.	.	.	.	.	.	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	.	.	.	D	I	A	G
Template Known Secondary structure		S		S						S	S																	T									T							.	.	.	.	.	.	.	.	.							T	T												S	T	T	.	.	.	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																								.	.	.	.														.
Template Conservation																																																												.	.	.	.														.
Template Sequence		V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	A	Q	E	K	F	G	V	T	P	.	.	.	.	D	L	T	T	L	G	K	V	I	G	G	G	L	.	P	V	G	A
Template Known Secondary structure						S	S	B		S	S	S		B				T	T												T	T								T	T	T	T	T	T	T		T	T							T				.	.	.	.	S						G	G	G	G	T	T	S	.
Template Predicted Secondary structure																																																												.	.	.	.														.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	.	A	G	A	D	H	A	I	I	P	V	M	L
Query Conservation																																																																					.
Alig confidence																.																																																					.
Template Conservation																.
Template Sequence		Y	G	G	R	A	E	I	M	K	M	V	A	P	A	.	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G	L	F	F
Template Known Secondary structure										T	T	S		T	T	.																						T	S	T	T																						T	T	T									T	T						S
Template Predicted Secondary structure																.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		333	.	.														.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	.	.	.	.	.	.	.	.	.	Q	F	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q	L
Template Known Secondary structure		S	S				S	S					T	T	S															T	T					S	S	.	.	.	.	.	.	.	.	.	T	T	S						T	T																		T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.										.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions