Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB77
Confidence100.00%DateThu Jan 5 11:14:48 GMT 2012
Rank11Aligned Residues367
% Identity13%Templated2byla1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40......... 50.........60.........70.........80...
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Query Sequence  QQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCA. . . NNYLGLANHPDLIAAAKAGMDSHGFGMASVRFIC
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Template Sequence  DDIFEREYKYGAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQG. HCHPKIVNALKSQVDKLTLTSR. . . . . A
Template Known Secondary structure  S
S




S

BTTT

SST
TT
.BT
TT




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   41........50.........60.........70.........80.........90. ........100.........110... .
 
   84.....90.........100.........110.........120.. .......130.........140.........
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Query Sequence  GTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETL. . . . . . . . . . . LGAEDAIISDALNHASIIDGVRLCKAK. . .
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Template Sequence  FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSY
Template Known Secondary structure  S

SST
SSSTT


TT

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STT


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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   150.........160.........170.........180.........190.. .......200.........210......
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Query Sequence  . . . . . . . . . RYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN. . . . LKGVCDLADKYDALVMVDDSHAVG
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Template Sequence  DGFGPFMPGFDIIPYNDLPALERAL. . . . . QDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT. .
Template Known Secondary structure  TTS
S

TT
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SSBTTTTSB


TTT

TTT..
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   195....200.........210......... 220.........230.........240.........250.........260.......
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGS
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Template Sequence  GLARTGRWLAVDY. ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLA
Template Known Secondary structure  TTTTTSSSSGGGG.GT


S
GGGGTTSS


TTS
TTSS

SSTT
TT
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   268.270.........280 .........290.........300.........310.........320.........330.........340......
 
   297..300.........310.........320.........330.. .......340.........350.........360.........370....
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Query Sequence  ELRDRLWANARQFREQMSAAGFTLAGADHAIIPVML. . GDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAA
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Template Sequence  ENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHG. . . . . . . DIIRFAPPLV
Template Known Secondary structure  TS
TTTTT


SS

TT
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TT
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   347..350.........360.........370.........380.........390.........400......... 410.........
 
   375....380.........390....
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Query Sequence  HTPEQITRAVEAFTRIGKQL
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Template Sequence  IKEDELRESIEIINKTILSF
Template Known Secondary structure 

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   420.........430.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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