Job Description P0AB77 Confidence 99.97% Date Thu Jan 5 11:14:48 GMT 2012 Rank 100 Aligned Residues 338 % Identity 14% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																													.																			.	.
Query SS confidence																																																													.																			.	.
Query Sequence		F	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	D	A	.	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.
Query Conservation																																																													.																			.	.
Alig confidence																																	.																												.																			.	.
Template Conservation																																	.
Template Sequence		F	Y	P	L	G	S	C	T	M	K	Y	N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	.	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y
Template Known Secondary structure					B	T	T	T															T	T	S	S			T	T	S		.	G	G	G																				T		S							S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
									124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	.	.	.	.	.	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A
Query Conservation		.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																		.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	G	E	V	D	L	E	A	L	K	R	E	L	G	P	.	.	.	.	.	.	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R
Template Known Secondary structure					T	T		T	T	T								T	T	S		T									T	T								B		T	T	S	S	B										S	T	.	.	.	.	.	.	T								S	S		T	T	S				T
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		N	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																											.																																																.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		R	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	.	I	M	G	W	A	R	P	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R
Template Known Secondary structure		T												T							G	G	G	G	G	G	.	T	T	T	T							T		S						T	T	T	T	T					T	T	S											G	G	G	G	G	G			S
Template Predicted Secondary structure																											.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
														265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	.	.	G	A	D	H	A	I	I	P	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.
Template Conservation
Template Sequence		G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A
Template Known Secondary structure			S	S									T	T					S	S	S	T	T	S																																									T	T		B		S	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	.	.	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L	K	K	P
Template Known Secondary structure		B		S	T	T													T	T							S		S	.	.	T	T	S	T	T								T	T	S																	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions