Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 26 Aligned Residues 362 % Identity 17% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		Y	Q	Q	L	T	N	D	L	E	T	A	R	A	E	G	L	F	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	.	.	.	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.						.																							.	.	.	.	.
Template Conservation																																																						.																							.	.	.	.	.
Template Sequence		W	R	A	L	L	E	A	E	K	T	L	D	S	G	V	Y	N	K	H	D	L	L	I	V	R	G	Q	G	A	R	V	W	D	A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	.	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	.	.	.	.	.
Template Known Secondary structure													S		S		S				S	S							B	T					T	T	S						S	S					T		T	T		.	B	T																				T	.	.	.	.	.
Template Predicted Secondary structure																																																						.																							.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																					.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																					.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	.	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.																					.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																					.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	P	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P
Template Known Secondary structure		T	S															T	S		T	T								S	S																	S								T	T					S	S						T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
					149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.	.																																													.	.	.	.
Query SS confidence		.	.	.																																													.	.	.	.
Query Sequence		.	.	.	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N
Query Conservation		.	.	.																																													.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.																				.	.	.	.																						.
Template Conservation																								.	.	.	.	.	.																																													.
Template Sequence		L	V	E	P	V	E	F	I	P	Y	N	D	V	E	A	L	K	R	A	V	D	E	.	.	.	.	.	.	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	.	T	G	M	G	R	T	G
Template Known Secondary structure			S	S							T	T											T	.	.	.	.	.	.	T								S			T	T	T	T	S																			T								T	T	.	T	T	T	T	T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.																																													.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R
Query Conservation
Alig confidence												.	.													.
Template Conservation												.	.													.
Template Sequence		K	R	F	A	F	E	H	F	G	I	.	.	V	P	D	I	L	T	L	A	K	A	L	G	.	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E
Template Known Secondary structure		S	S	S	T					T		.	.			S						G	G	G	G	.	T	T	S	S													T	S		T	T	S	S			S	S	T	T																			T	T
Template Predicted Secondary structure												.	.													.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T
Query Conservation
Alig confidence																																				.																						.	.	.	.	.	.	.
Template Conservation																																				.																						.	.	.	.	.	.	.
Template Sequence		L	G	P	W	F	M	E	K	L	R	A	I	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	.	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	A	G	P	.	.	.	.	.	.	.	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E
Template Known Secondary structure												T	S			T	T								T	T							S	S		.	S																		S	S	T	.	.	.	.	.	.	.	T								T	T
Template Predicted Secondary structure																																				.																						.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		382	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	E	A	F	T	R	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	E	A	V	R	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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