Job Description P0AB77 Confidence 99.93% Date Thu Jan 5 11:14:48 GMT 2012 Rank 197 Aligned Residues 336 % Identity 16% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		42	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.					110	.
Predicted Secondary structure								.																									.																			.	.	.															.							.	.	.	.
Query SS confidence								.																									.																			.	.	.															.							.	.	.	.
Query Sequence		S	H	V	I	N	F	.	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	.	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	.	.	.	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	D	A	I	L	Y	S	.	.	.	.	S	C
Query Conservation								.																									.																			.	.	.															.							.	.	.	.
Alig confidence								.								.	.	.	.														.																			.	.	.															.							.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		R	V	G	L	E	L	I	A	S	E	N	F	A	S	.	.	.	.	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	L	G	Y	P	G	Q	R	Y	Y	G	G	T	E	H	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G
Template Known Secondary structure			S	S					T	T						.	.	.	.								T	S	G	G	G	T							T	T			S	S	S																				T	T			T	T	T								S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query Sequence		F	D	A	N	G	G	L	F	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	.	.	.	.	.	.	.	.	.	.	Y	R	Y	A	N	N	.	.	.	.	.	.	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H
Query Conservation																																									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	L	F	.	.	.	.	.	H	P
Template Known Secondary structure													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B													.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A
Query Conservation
Alig confidence												.	.																																						.	.	.	.	.
Template Conservation												.	.																																						.	.	.	.	.
Template Sequence		K	L	I	I	A	G	T	S	C	Y	.	.	S	R	N	L	D	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	.	.	.	.	.	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F
Template Known Secondary structure		S							S	S		.	.		S														T	T								T	T	T							T	S	S		.	.	.	.	.		G	G	G	T		S						S	S	G	G	G				S
Template Predicted Secondary structure												.	.																																						.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		256	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																														.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																																																														.	.
Query Sequence		A	R	K	E	.	.	.	.	.	.	.	.	.	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	.	.	A	G	A	D
Query Conservation						.	.	.	.	.	.	.	.	.																																																														.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																																														.	.
Template Conservation
Template Sequence		Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	G	Y	K	I	V	T	G	G	S	D
Template Known Secondary structure					S	B					B												T	T	T	T			S																	T	S																								T	T				G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure										.																									.	.																.	.	.	.
Query SS confidence										.																									.	.																.	.	.	.
Query Sequence		H	A	I	I	P	V	M	L	.	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	.	.	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	.	.	.	.	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q
Query Conservation										.																									.	.																.	.	.	.
Alig confidence										.																									.	.																.	.	.	.
Template Conservation
Template Sequence		N	H	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L
Template Known Secondary structure		S	S						G	G	G	G	T													T	T									S	S		S		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions