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Job DescriptionP0AB77
Confidence99.97%DateThu Jan 5 11:14:48 GMT 2012
Rank102Aligned Residues312
% Identity15%Templated1o69a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.84

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100.........110.........120.. .......130.........140
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Query Sequence  IAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETL. LGAEDAIISDALNHASII
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Template Sequence  LKYIEEVFK. . . . . . . . SNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV
Template Known Secondary structure  ........TTTS
TT

SS
TT

TT
SSS
GGGT
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   15....20... ......30.........40.........50.........60.........70.........80......
 
   141........150.... .....160.........170.........180.........190.........200.........210.....
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Query Sequence  DGVRLCKAKRYRYA. . . . . NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAV
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Template Sequence  APICYLKAKPVFIDCDETYNIDVDLLKLAIKE. . . . . . CEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEAL
Template Known Secondary structure  TT

B
TTSSB
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GGG



TT

TT
T
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   87..90.........100.........110........ .120.........130.........140.........150.........160
 
   216...220.........230.........240.........250.........260.........270....... ..280.....
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Query Sequence  GFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSL. . . . . . . . . . APAIVAAS
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Template Sequence  GSFYKNKALG. . . . . TFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLG
Template Known Secondary structure  T
TTTT.....SSSS

TTSSS

SS
S
TBT


SSSS


SS


B
B

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   161........170 .........180.........190.........200.........210.........220.........230.....
 
   286...290.........300.........310.........320 .........330.........
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Query Sequence  IKVLEMVEAGSELRDRLWANARQFREQMSAAGFTL. . . . . . . . . . . . . . . . . . . . . . . . . . AGADHAIIPVMLGDAVVAQ
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Template Conservation 
                          
                                                    
Template Sequence  AIGVAQMEVLEQRVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKIS
Template Known Secondary structure  TTTTT




TT


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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   340.........350........ .360.........370.........380.........390..
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Query Sequence  KFARELQKEGIYVTGFFYP. . . . . . . . . . . . . . . . . VVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
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Template Sequence  KLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK
Template Known Secondary structure  TT


B




GGG
GGGTT

S


TT


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   316...320.........330.........340.........350.........360.........370.........380.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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