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Job DescriptionP0AB77
Confidence99.97%DateThu Jan 5 11:14:48 GMT 2012
Rank86Aligned Residues319
% Identity14%Templatec3uwcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.. .......130.......
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Query Sequence  PDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETL. LGAEDAIISDALNHA
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Template Sequence  EPYLNDLREFIKT. . . . . . . . . ADFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAXSFKXLNIGAGDEVITCANTFI
Template Known Secondary structure  .........T

SS
TT
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   16...20........ .30.........40.........50.........60.........70.........80......
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  SIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGF
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Template Sequence  ASVGAIVQAGATPVLVDSENGYVI. . . . DPEKIEAAITDKTKAIXPVHYTGNIADXPALAKIAKKHNLHIVEDACQTILG
Template Known Secondary structure  TT

B
TTSSB....
GGGTGGG

TT

B
GGG



TT

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TT
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   87..90.........100.........110 .........120.........130.........140.........150.........160..
 
   218.220.........230.........240....... ..250.........260.........270.........280 ........
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Query Sequence  VGENGRGSHEYCDVMGRVDIITGTLGKALG. . GASGGYTAARKEVVEWLRQRSRPYLFSNSLAPA. . . . . . . IVAASIKV
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Template Sequence  RINDKFVG. . . . . SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRXDTIQAVIA
Template Known Secondary structure  TTTT.....SSSS
SSSSSS

SS

S
TBTTTTSS


B
B

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   163......170 .........180.........190.........200.........210.........220.........230.......
 
   289290.........300.........310.........320...... ...330.........340.........350.........360...
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Query Sequence  LEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHA. . . . . IIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKG
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Template Conservation                      
   
                                
   
   

 
           
Template Sequence  NRLXNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAXHLQ
Template Known Secondary structure  GGGTGGGTTT




TT


SSTTTTB

B
S
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   364.....370.........380.........390.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . QARIRTQMSAAHTPEQITRAVEAFTRIGKQLG
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Template Sequence  PAAKSLGYQQGDFPXAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH
Template Known Secondary structure  GGGGGG


TTS



TTS
TTT
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   318.320.........330.........340.........350.........360.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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