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Job DescriptionP0AB77
Confidence100.00%DateThu Jan 5 11:14:48 GMT 2012
Rank65Aligned Residues348
% Identity14%Templatec3qguB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: l,l-diaminopimelate aminotransferase from chalmydomonas reinhardtii
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.. .......80.........90.........100.. .......110....
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Query Sequence  ADGSHVINFCANNYLGLANHPDLIAAAKAGMDSH. . GFGMASVRFICGTQDSHKELEQKLAAFLGM. . EDAILYSSCFDA
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Template Sequence  NPDAKIISLGIGDT. TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCD
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GGGS




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   115....120.........130.........140.........150......... 160.........170.........180........
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Query Sequence  NGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQ. . . . . . ELEARLKEAREAGARHVLIATDGVFSMDG
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Template Sequence  I. ARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTG
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SSS
S

TTT
S

B
SSSBTT

GGGTT


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   145 ....150.........160.........170.........180.........190.........200.........210.........220...
 
   189190 .........200.........210.........220.........230.........240...... ...250.........260...
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Query Sequence  VI. . . ANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKAL. . GGASGGYTAARKEVVEW
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Template Sequence  AAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYA
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T

TTGGG


TTS
SSGGGSTTGGGT
SGGGT
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TT
B
T
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   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   264.. ...270.........280.........290.........300.........310.........320.... .....330....
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Query Sequence  LRQ. . . . . . . . RSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGAD. HAIIPVMLGD
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Template Sequence  NGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPG
Template Known Secondary structure  TS
BS




TSTT

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   304.....310.........320.........330.........340.........350.........360.........370.........380...
 
   335....340.........350.........360.........370.........380.........390.
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Query Sequence  AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIG
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Template Sequence  KPSWDVFAEILERCNIVTTPGSGYG. PAGEGFVRASAF. . GSRENILEAVRRFKEAY
Template Known Secondary structure  S


GGGG
.GGGTT

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   384.....390.........400........ .410.........420 .........430.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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