Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 24 Aligned Residues 374 % Identity 14% Template c3oksB_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-aminobutyrate transaminase; PDBTitle: crystal structure of 4-aminobutyrate transaminase from mycobacterium2 smegmatis Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																		.																															.	.	.
Query SS confidence																		.																															.	.	.
Query Sequence		Q	Q	L	T	N	D	L	E	T	A	R	A	E	G	L	F	.	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	N	N	Y	.	.	.	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I
Query Conservation																		.																															.	.	.
Alig confidence																		.																															.	.	.			.
Template Conservation																																																						.
Template Sequence		Q	A	L	I	D	R	K	G	T	A	V	A	R	G	V	G	T	T	M	P	V	Y	A	V	R	A	G	G	G	I	V	E	D	V	D	G	N	R	L	I	D	L	G	S	G	I	A	V	T	T	V	G	.	N	S	A	P	K	V	V	E	A	V	R	S	Q	V	G	D	F	T	H	T	C	F	M	V	T	P	Y
Template Known Secondary structure												S		T	T	S			S	S	S	S							T	T					T	T	S						S	S					T		T	T		.	T	T													T	T		S			T	T	T	T	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.																																				.	.
Query SS confidence																																										.	.	.																																				.	.
Query Sequence		C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	.	.	.	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	.	.
Query Conservation																																										.	.	.																																				.	.
Alig confidence														.																												.	.	.																																				.	.
Template Conservation														.
Template Sequence		E	G	Y	V	A	V	C	E	Q	L	N	R	.	L	T	P	V	R	G	D	K	R	S	A	L	F	N	S	G	S	E	A	V	E	N	A	V	K	I	A	R	S	H	T	H	K	P	A	V	V	A	F	D	H	A	Y	H	G	R	T	N	L	T	M	A	L	T	A	K	V	M	P	Y	K	D	G	F	G	P	F
Template Known Secondary structure														.		S	S			S	S							S	S																									T	T					S	S											T	T	T	T	T	T			S
Template Predicted Secondary structure														.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
																												158	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																						.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																						.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	.	.	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																						.	.	.	.
Template Conservation
Template Sequence		A	P	E	I	Y	R	A	P	L	S	Y	P	F	R	D	A	E	F	G	K	E	L	A	T	D	G	E	L	A	A	K	R	A	I	T	V	I	D	K	Q	I	G	A	D	N	L	A	A	V	V	I	E	P	I	Q	G	E	G	G	F	I	V	P	A	D	G	F	L	P	T	L	L	D	W	C	R	K	N	D	V
Template Known Secondary structure			S	S													G	G	G						T																	T		G	G	G								S	S	B	T	T	T	T		B				T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S
Query Conservation
Alig confidence											.																				.	.	.	.
Template Conservation											.																				.	.	.	.
Template Sequence		V	F	I	A	D	E	V	Q	T	.	G	F	A	R	T	G	A	M	F	A	C	E	H	E	G	I	D	P	D	.	.	.	.	L	I	V	T	A	G	I	A	G	G	L	P	L	S	A	V	T	G	R	A	E	I	M	D	S	P	H	V	S	G	L	G	G	T	Y	G	G	N	P	I	A	C	A	A	A	L	A
Template Known Secondary structure								T	T	T	.	T	T	T	T	T	S	S	S	S	G	G	G	T	T	T				S	.	.	.	.							T	T	T	T	S	S												T		S		T	T	S	S			S	S	S	S
Template Predicted Secondary structure											.																				.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																					.	.													.	.	.	.	.	.	.
Query SS confidence																																					.	.													.	.	.	.	.	.	.
Query Sequence		I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	.	.	A	G	A	D	H	A	I	I	P	V	M	L	.	.	.	.	.	.	.	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F
Query Conservation																																					.	.													.	.	.	.	.	.	.
Alig confidence																																					.	.													.	.	.	.	.	.	.																							.	.
Template Conservation																																																																																.	.
Template Sequence		T	I	E	T	I	E	S	E	G	L	V	A	R	A	Q	Q	I	E	K	I	M	K	D	R	L	G	R	L	Q	A	E	D	D	R	I	G	D	V	R	G	R	G	A	M	I	A	M	E	L	V	K	A	G	T	T	E	P	D	A	D	L	T	K	A	L	C	A	G	A	H	A	A	G	V	I	V	L	S	.	.
Template Known Secondary structure									T	T																								T	T								T	T							B	S	T	T	S			B															T	T						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	C	G	T	Y	G	N	V	V	R	F	L	P	P	L	S	I	G	D	D	L	L	N	E	G	L	D	V	L	E	E	V	L	R
Template Known Secondary structure		.	.	.			T	T	S									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.