Job Description P0AB77 Confidence 99.96% Date Thu Jan 5 11:14:48 GMT 2012 Rank 148 Aligned Residues 329 % Identity 16% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

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		42	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.
Predicted Secondary structure							.																								.																	.	.	.																							.
Query SS confidence							.																								.																	.	.	.																							.
Query Sequence		S	H	V	I	N	.	F	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	.	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	.	.	.	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	D	A	I	L	.	Y	S	S	C	F	D	A	N
Query Conservation							.																								.																	.	.	.																							.
Alig confidence							.									.	.	.	.												.																	.	.	.																							.
Template Conservation																.	.	.	.
Template Sequence		C	E	G	L	E	X	I	A	S	E	N	F	T	L	.	.	.	.	P	E	V	X	E	V	X	G	S	I	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	F	V	D	E	I	E	T	L	A	I	E	R	C	K	K	L	F	N	C	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N
Template Known Secondary structure				S					T	T						.	.	.	.								T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	G	L	F	E	T	L	L	G	A	E	D	A	I	I	S	.	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K
Query Conservation																		.
Alig confidence																		.																	.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template Conservation																																			.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template Sequence		Q	G	V	Y	A	A	L	I	N	P	G	D	K	I	L	G	X	D	L	K	X	Y	E	S	C	F	Y	G	V	E	L	D	G	.	.	.	.	.	.	.	R	I	D	Y	E	K	V	R	E	I	A	K	K	E	.	.	.	.	.	K	P	K	L	I	V	C	G	A	.	.	S	A	Y	A	R	V	I	D	F	A
Template Known Secondary structure									S		T	T											S									T	T	S	.	.	.	.	.	.	.	S														.	.	.	.	.			S							.	.	S	S			S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S
Query Conservation
Alig confidence																																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		K	F	R	E	I	A	D	E	I	G	A	Y	L	F	A	D	I	A	H	I	A	G	L	V	V	A	G	E	H	P	.	.	.	.	.	S	P	F	P	Y	A	H	V	V	S	S	T	T	H	K	T	L	R	G	P	R	G	G	I	I	X	T	N	D	E	E	L	A	K	K	I	N	S	A	I	F	P	G	I	Q
Template Known Secondary structure											T								T	T	T						T	T	S	S		.	.	.	.	.			T	T	T		S						S	S	T	T	T		S		S							S													T	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																													.	.																	.
Query SS confidence																				.	.																													.	.																	.
Query Sequence		N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	.	.	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	.	.	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	.	V	A	Q	K	F	A	R	E	L	Q	K	E	G
Query Conservation																				.	.																													.	.																	.
Alig confidence																				.	.																													.	.																	.
Template Conservation
Template Sequence		G	G	P	L	X	H	V	I	A	A	K	A	V	G	F	K	F	N	L	S	D	E	W	K	V	Y	A	K	Q	V	R	T	N	A	Q	V	L	A	N	V	L	X	D	R	K	F	K	L	V	S	D	G	T	D	N	H	L	V	L	X	S	F	L	D	R	E	F	S	G	K	D	A	D	L	A	L	G	N	A	G
Template Known Secondary structure		S	S																	T	S																								T	T				G	G	G	S		S	S	S							T	T	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																.	.	.										.	.	.	.
Query SS confidence																.	.	.										.	.	.	.
Query Sequence		I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	.	.	.	Q	A	R	I	R	T	Q	M	S	.	.	.	.	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q
Query Conservation																.	.	.										.	.	.	.
Alig confidence																.	.	.										.	.	.	.
Template Conservation
Template Sequence		I	T	A	N	K	N	T	V	P	G	E	I	R	S	P	F	I	T	S	G	L	R	L	G	T	P	A	L	T	A	R	G	F	K	E	K	E	X	E	I	V	S	N	Y	I	A	D	I	L	D	D
Template Known Secondary structure										T	T			S		T	T	T		S												T	T																			T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions