Job Description P0AB77 Confidence 99.95% Date Thu Jan 5 11:14:48 GMT 2012 Rank 177 Aligned Residues 343 % Identity 12% Template c3mc6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 Resolution 3.15 Å

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		45	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																				.																														.	.	.	.
Query SS confidence													.	.																				.																														.	.	.	.
Query Sequence		I	N	F	C	A	N	N	Y	L	G	L	.	.	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	.	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	.	.	.	D	A	I	L	Y	S	S	C	F	D	A	N	G	G
Query Conservation													.	.																				.																														.	.	.	.
Alig confidence													.	.																				.																														.	.	.	.
Template Conservation
Template Sequence		T	Q	W	K	E	G	K	V	S	G	A	V	Y	H	G	G	D	D	L	I	H	L	Q	T	I	A	Y	E	K	Y	C	V	A	N	Q	L	H	P	D	V	F	P	A	V	R	K	M	E	S	E	V	V	S	M	V	L	R	M	F	N	A	P	S	D	T	G	C	G	T	T	T	S	G	G	T	E	S	L	L	L
Template Known Secondary structure				G	G	G	T		B	S	S	S		S																	T	S	S		B	T	T		T	T	T																			T	T			T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		118	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		L	F	E	T	L	L	G	.	.	.	.	.	.	.	.	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	L	S	A	K	M	Y	A	L	H	H	R	G	I	T	E	P	E	I	I	A	P	V	T	A	H	A	G	F	D	K	A	A	Y	Y	F	G	M	K	L	R	H	V	E	L	D	P	T	T	Y	Q	V	D	L	G	K	V	K	K	F	I	N	K	N	T	V	L	L	V	G	S	A	P	N	F	P	H	G	I
Template Known Secondary structure														S			S	S							T	T	S											S									B		T	T	T		S	B		T	T	T	T	G	G	G			S	S								T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																.	.	.	.																													.
Query SS confidence																																.	.	.	.																													.
Query Sequence		I	A	N	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	.	.	.	.	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	.	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L
Query Conservation																																.	.	.	.																													.
Alig confidence																																.	.	.	.																													.
Template Conservation
Template Sequence		A	D	D	I	E	G	L	G	K	I	A	Q	K	Y	K	L	P	L	H	V	D	S	C	L	G	S	F	I	V	S	F	M	E	K	A	G	Y	K	N	L	P	L	L	D	F	R	V	P	G	V	T	S	I	S	C	D	T	H	K	Y	G	F	A	P	K	G	S	S	V	I	M	Y	R	N	S	D	L	R	M	H
Template Known Secondary structure				S		T	T	T	T	T					T	T							T	T	T	T					G	G	G	T	T	T	T			S					S	T	T	S	T	T								T	T	T	T	T				S	S							S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		265	.												.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query Sequence		R	Q	.	.	.	.	.	.	.	.	.	.	.	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	.	.	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Conservation
Template Sequence		Q	Y	Y	V	N	P	A	W	T	G	G	L	Y	G	S	P	T	L	A	G	S	R	P	G	A	I	V	V	G	C	W	A	T	M	V	N	M	G	E	N	G	Y	I	E	S	C	Q	E	I	V	G	A	A	M	K	F	K	K	Y	I	Q	E	N	I	P	D	L	D	I	M	G	N	P	R	Y	S	V	I	S	F
Template Known Secondary structure		T	S			B	T	T		T	T	S		B			S	S	S		S	S		B																																								S		T	T					S				S	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence																													.	.	.	.	.	.													.
Template Conservation																													.	.	.	.	.	.													.
Template Sequence		S	S	K	T	L	N	I	H	E	L	S	D	R	L	S	K	K	G	W	H	F	N	A	L	Q	K	P	.	.	.	.	.	.	V	A	L	H	M	A	F	T	R	L	S	A	.	H	V	V	D	E	I	C	D	I	L	R	T	T	V	Q	E	L
Template Known Secondary structure				T	T	T	T										T	T	T		B						S	S	.	.	.	.	.	.									T	T	T	T	.		T
Template Predicted Secondary structure																													.	.	.	.	.	.													.
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.							.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions