Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 36 Aligned Residues 346 % Identity 18% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	.	.	.	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F
Query Conservation																													.	.	.
Alig confidence																													.	.	.						.																					.	.	.	.	.	.	.
Template Conservation																																					.																					.	.	.	.	.	.	.
Template Sequence		G	A	P	I	A	X	E	R	G	K	G	A	Y	F	W	D	V	D	G	N	K	Y	I	D	Y	L	A	A	Y	G	P	I	I	T	G	.	H	A	H	P	H	I	T	K	A	I	T	T	A	A	E	N	G	V	L	Y	.	.	.	.	.	.	.	G	T	P	T	A	L	E	V	K	F	A	K	X	L	K	E	A
Template Known Secondary structure		S										B	T					T	T									G	G	G	T	T		S	S		.	B	T																S			.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																					.																					.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.													150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	M	.	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	.	.	.	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A
Query Conservation					.																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	P	A	L	D	K	V	R	F	V	N	S	G	T	E	A	V	X	T	T	I	R	V	A	R	A	Y	T	G	R	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L	V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	F	N	N	V	E	T	L	K	E
Template Known Secondary structure			T	T		S						S	S																									T	T					S	S	G	G	G	G	B					B	S	S	T	T							T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T
Query Conservation																															.	.	.	.
Alig confidence									.	.	.																				.	.	.	.																									.	.																					.
Template Conservation									.	.	.																																																.	.																					.
Template Sequence		A	L	D	K	W	G	H	.	.	.	E	V	A	A	I	L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	A	L	V	I	Y	D	E	V	I	T	A	F	.	.	R	F	X	Y	G	G	A	Q	D	L	L	G	V	T	P	D	L	T	A	L	.
Template Known Secondary structure							G	G	.	.	.	G								S	S	B		T	T	S		B				T	T											T	T	T								T	T	T	T	T	.	.	T	S	S	S	S							T				S					.
Template Predicted Secondary structure									.	.	.																																																.	.																					.
Template SS confidence
		195	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.																																																																											.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	V	I	G	G	G	L	P	I	G	A	Y	G	G	K	K	E	I	X	E	Q	V	A	P	L	G	P	A	Y	Q	A	G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L	E	K	G	I	L	E	Q	A	A	K
Template Known Secondary structure		.	.	.			T	T	T	T	S	S												T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
				317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.														.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T
Query Conservation		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		H	N	I	D	I	T	L	N	R	L	K	G	A	L	T	V	Y	F	T	T	N	T	I	E	D	Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	G	V	N	L	A	P	S	K	Y	E	.	.	.	.	.	.	.	.	.	A	W	F	L	T	T	E	H	T	K	E	D	I	E
Template Known Secondary structure		T	T									T	T							S	S	S				S							S															T	T					S	S	T	T		.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	I	E	A	V	G	R	A	F	A	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions