Job Description P0AB77 Confidence 99.93% Date Thu Jan 5 11:14:48 GMT 2012 Rank 206 Aligned Residues 317 % Identity 14% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.
Predicted Secondary structure																																															.	.	.	.	.	.																								.
Query SS confidence																																															.	.	.	.	.	.																								.
Query Sequence		P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	.	.	.	.	.	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	G	A	E	.	D	A	I	I	S
Query Conservation																																															.	.	.	.	.	.																								.
Alig confidence																			.	.																											.	.	.	.	.	.																								.
Template Conservation																			.	.
Template Sequence		D	S	V	L	N	A	D	K	L	V	T	E	N	Y	K	E	K	.	.	P	Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	M	L	N	V	E	T	L	Y	V
Template Known Secondary structure																			.	.				T	T	S	S															S	S		T	T	T	T	T	T																							T	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																														.	.	.	.																																	.	.	.
Query SS confidence																														.	.	.	.																																	.	.	.
Query Sequence		D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	.	.	.	.	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	.	.	.	N	L	K	G	V	C	D	L	A	D	K	Y	D
Query Conservation																														.	.	.	.																																	.	.	.
Alig confidence																														.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R	G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y	D	L	F	L	N	D	L	R	N	I	P	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K
Template Known Secondary structure			S	S											T	T	T											T	T	T	T														S		S	S								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																										.	.	.	.																														.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																														.	.	.	.	.	.	.
Query Sequence		A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	.	.	.	.	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	.	.	.	.	.	.	.	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F
Query Conservation																										.	.	.	.																														.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K	N	Q	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S
Template Known Secondary structure									S		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T	T									S	S																	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.										.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	.	.	.	.	.	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	.	.	.	.	.	.	.	.	.	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q
Query Conservation																				.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																												.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q	K	K	Y	N	L	N	Y	D	W	N	V	Y	K	K	Q	R	G	L	F	S	F	V	P	L	L	A	.	.	.	.	.
Template Known Secondary structure		S																																																G	G	G	G	T					G	G	G	G	S	S			S	S					G	G	G	G	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		K	I	A	E	H	L	K	T	H	H	I	Y	I	I	N	N	G	.	.	.	.	.	.	.	.	.	.	.	R	I	N	V	.	S	G	I	T	K	N	N	V	D	Y	I	A	D	K	I	C	L	S	L	S	Q	I
Template Known Secondary structure		G	G	T	T	T	T	T	T	T	T					T	T	S	.	.	.	.	.	.	.	.	.	.	.				G	.	G	G			T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.												380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions