Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 33 Aligned Residues 368 % Identity 18% Template c3hmuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of a class iii aminotransferase from2 silicibacter pomeroyi Resolution 2.10 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.												.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																										.											.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																										.											.
Query Sequence		T	N	D	L	E	T	A	R	A	E	G	L	F	.	.	.	.	.	.	.	.	.	.	.	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	.	C	A	N	N	Y	L	G	L	A	N	.	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																										.											.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																										.											.
Template Conservation
Template Sequence		T	A	E	L	Q	A	L	D	A	A	H	H	L	H	P	F	S	A	N	N	A	L	G	E	E	G	T	R	V	I	T	R	A	R	G	V	W	L	N	D	S	E	G	E	E	I	L	D	A	M	A	G	L	W	C	V	N	I	G	Y	G	R	D	E	L	A	E	V	A	A	R	Q	M	R	E	L	P	Y	Y	N
Template Known Secondary structure																T	T	S																		B	T					T	T							T	T					T		T	T		B																	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																													.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	.	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.	.	.	.	.	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L
Query Conservation																													.	.																					.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																			.	.																					.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		T	F	F	K	T	T	.	.	.	H	V	P	A	I	A	L	A	Q	K	L	A	E	L	A	P	G	D	L	N	H	V	F	F	A	G	G	G	S	E	A	N	D	T	N	I	R	M	V	R	T	Y	W	Q	N	K	G	Q	P	E	K	T	V	I	I	S	R	K	N	A	Y	H	G	S	T	V	A	S	S	A	L
Template Known Secondary structure		S	S	S	S			.	.	.															S		T	T								S	S																			T	T		T	T								T	T					S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		146																													.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query Sequence		C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																				.	.	.	.
Template Conservation																																																								.	.
Template Sequence		G	G	M	A	G	M	H	A	Q	S	G	L	I	P	D	V	H	H	I	N	Q	P	N	W	W	A	E	G	G	D	M	D	P	E	E	F	G	L	A	R	A	R	E	L	E	E	A	I	L	E	L	G	E	N	.	.	R	V	A	A	F	I	A	E	P	V	Q	G	A	G	G	V	I	V	A	P	D	S	Y	W
Template Known Secondary structure		S								T	T				S	S														T	T																							G	G	.	.	G								S	S	B	S	T	T	T		B				T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F
Query Conservation
Alig confidence																							.																			.	.
Template Conservation																							.																			.	.
Template Sequence		P	E	I	Q	R	I	C	D	K	Y	D	I	L	L	I	A	D	E	V	I	C	.	G	F	G	R	T	G	N	W	F	G	T	Q	T	M	G	I	R	P	.	.	H	I	M	T	I	A	K	G	L	S	S	G	Y	A	P	I	G	G	S	I	V	C	D	E	V	A	H	V	I	G	K	D	E	F	N	H	G	Y
Template Known Secondary structure											T	T								T	T	T	.	T	T	T	T	T	S	S	S							T				.	.	S						G	G	G	T	T	T	S	S																T	T	S
Template Predicted Secondary structure																							.																			.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.																		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		T	Y	S	G	H	P	V	A	A	A	V	A	L	E	N	L	R	I	L	E	E	E	.	N	I	L	D	H	V	R	N	V	A	A	P	Y	L	K	E	K	W	E	A	L	T	D	H	P	L	V	G	E	A	K	I	V	G	M	M	A	S	I	A	L	T	P	N	K	A	S	R	A	K	F	A	S	E	P	G	T
Template Known Secondary structure		T	T	T	T																		T	.	T								T											G	G	G	G	S	T	T								T	T								S		G	G	G	T			B	S	S		T	T
Template Predicted Secondary structure																								.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		I	G	Y	I	C	R	E	R	C	F	A	N	N	L	I	M	R	H	V	G	.	.	.	.	.	.	.	.	D	R	M	I	I	S	P	P	L	V	I	T	P	A	E	I	D	E	M	F	V	R	I	R	K	S	L	D	E	A
Template Known Secondary structure													T	T	B						T	.	.	.	.	.	.	.	.	T								T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420									.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450