Phyre 2 alignment of P0AB77 with c3ftbA

Job Description P0AB77
Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012

Rank 50 Aligned Residues 328

% Identity 13% Template c3ftbA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of the histidinol-phosphate2 aminotransferase from clostridium acetobutylicum

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	44	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure								.																																																					.	.
Query SS confidence								.																																																					.	.
Query Sequence	V	I	N	F	C	A	N	.	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	.	.	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E
Query Conservation								.																																																					.	.
Alig confidence								.						.	.																				.	.	.	.	.	.	.	.	.																		.	.
Template Conservation														.	.																				.	.	.	.	.	.	.	.	.
Template Sequence	L	L	D	Y	S	S	N	I	N	P	L	G	I	.	.	P	K	S	F	L	N	N	I	D	E	G	I	K	N	L	G	V	Y	P	.	.	.	.	.	.	.	.	.	D	V	N	Y	R	R	L	N	K	S	I	E	N	Y	L	K	L	K	D	I	G	I	V	L	G	N	G	A	S	E	I	I	E	L	S	I	S
Template Known Secondary structure				T	T					T	T		S	.	.						T	T							G	G	G	S			.	.	.	.	.	.	.	.	.		T	T													T			S							S	S										T
Template Predicted Secondary structure														.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
	28	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

	121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	.	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	G	V	C	D	L
Query Conservation																																					.
Alig confidence	.	.	.	.																																	.
Template Conservation	.	.	.	.
Template Sequence	.	.	.	.	L	F	E	K	I	L	I	I	V	P	S	Y	A	E	Y	E	I	N	A	K	K	H	G	V	S	V	V	F	S	Y	L	D	E	N	M	C	I	D	Y	E	D	I	I	S	K	I	D	D	V	D	S	V	I	I	G	N	P	N	N	P	N	G	G	L	I	N	K	E	K	F	I	H	V	L	K	L
Template Known Secondary structure	.	.	.	.	T		S							S			T									T	T										T	T	S											T	T	T		S						T	T	B	T	T	T	T	B
Template Predicted Secondary structure	.	.	.	.
Template SS confidence
					97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence	A	E	E	K	K	K	T	I	I	I	D	E	A	F	I	E	F	T	G	D	P	S	S	S	F	V	G	E	I	K	N	Y	S	C	L	F	I	I	R	A	M	T	K	F	F	A	M	P	G	I	R	F	G	Y	G	I	T	N	N	K	E	I	.	.	.	A	A	K	I	K	A	K	Q	N	P	W	N	I	N	C
Template Known Secondary structure					T								S	S	G	G	G	T			T	T	S	S	S	G	G	G	T	T	T		S	S							S	S	S	T	T	S		G	G	G								S					.	.	.						T	T	S		T	T		S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
	173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	.	.	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y
Query Conservation																																								.	.
Alig confidence																																								.	.																	.
Template Conservation																																																										.
Template Sequence	F	A	E	M	A	A	I	N	C	L	K	D	T	N	Y	I	E	E	S	L	L	W	I	K	K	E	R	K	R	F	I	E	E	L	N	K	I	G	F	I	K	R	V	F	S	P	H	A	N	F	V	L	C	R	L	E	N	.	I	S	G	E	K	L	Y	D	S	L	L	K	E	D	I	V	I	R	R	C	C	N
Template Known Secondary structure									T	S	S																										S	S	S								S	S	S							S	S	.	S											T	T	T							T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

	358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence			.													.	.	.
Template Conservation			.													.	.	.
Template Sequence	F	I	.	G	L	D	D	S	F	V	R	F	A	I	K	.	.	.	D	E	K	K	N	T	K	F	L	R	A	L	K	G	V	E	N	N	L
Template Known Secondary structure	S	T	.	T			T	T								.	.	.																		T
Template Predicted Secondary structure			.													.	.	.
Template SS confidence
	329	330		.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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