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Job DescriptionP0AB77
Confidence99.97%DateThu Jan 5 11:14:48 GMT 2012
Rank90Aligned Residues320
% Identity14%Templatec3fkdC_
PDB info PDB header:lyaseChain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50 .........60.........70.........80.........90.........100.. .......110.........120
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Query Sequence  VINFCAN. NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM. . EDAILYSSCFDANGGLFE
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Template Sequence  IVNFSTTVWTDG. . . DDHLEKHLVENLNCI. RHYPEPDA. . . . . . . . GTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQ
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TGGGG.GS


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   17..20........ .30.........40... ......50. ........60.........70.........80....
 
   121........130.........140.........150.........160.........170.........180.........190........ .
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Query Sequence  TLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCD. L
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Template Sequence  AF. . RGSRSLIAIPSFAEYEDACRXYEHEVCFYPSNEDI. . . . . . . . GEADFSNXDFCWLCNPNNPDGRLLQRTEILRLL
Template Known Secondary structure  T..TT
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   86. ..90.........100.........110.........120.. .......130.........140.........150.....
 
   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  ADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAP
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Template Sequence  NDHPDTTFVLDQSY. VSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKDFXKRVAAFSTPWAVNA. . . .
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   156...160......... 170.........180.........190.........200.........210.........220.........230
 
   280.........290.........300.........310...... ...320.........330.........340.........350........
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Query Sequence  AIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA. GFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYP
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Template Sequence  LAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYXLEEYNXLIRDASNF
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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   359360.........370.........380.........390....
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Query Sequence  VVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL
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Template Sequence  . RGLDESYVRITTQ. . . RPAQNQLFIKALETFLEKY
Template Known Secondary structure  .TT

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   311........320... ......330.........340..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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