Job Description P0AB77 Confidence 99.97% Date Thu Jan 5 11:14:48 GMT 2012 Rank 109 Aligned Residues 355 % Identity 13% Template c3fdbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative plp-dependent beta-cystathionase; PDBTitle: crystal structure of a putative plp-dependent beta-cystathionase2 (aecd, dip1736) from corynebacterium diphtheriae at 1.99 a resolution Resolution 1.99 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	.	.	.	.	E	D	A
Query Conservation																																																																											.	.	.	.
Alig confidence																									.																													.	.	.	.	.																	.	.	.	.
Template Conservation																									.																													.	.	.	.	.
Template Sequence		R	A	R	N	T	X	K	W	T	R	Y	G	Q	G	V	L	P	L	W	V	A	E	S	.	D	F	S	T	C	P	A	V	L	Q	A	I	T	D	A	V	Q	R	E	A	F	G	Y	Q	P	D	G	S	.	.	.	.	.	L	L	S	Q	A	T	A	E	F	Y	A	D	R	Y	G	Y	Q	A	R	P	E	W	I
Template Known Secondary structure				T							S	S		T	T	S					S	S			.		S																T	T			S	S			S	S		.	.	.	.	.																				G	G	G
Template Predicted Secondary structure																									.																													.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	I	P	D	V	V	R	G	L	Y	I	A	I	D	H	F	T	P	A	Q	S	K	V	I	V	P	T	P	A	Y	P	P	F	F	H	L	L	S	A	T	Q	R	E	G	I	F	I	D	A	T	G	G	I	N	L	H	D	V	E	K	G	F	Q	A	G	A	R	S	I	L	L	C	N	P	Y	N	P	L	G
Template Known Secondary structure					S														S		T	T								S			T										T									T	T	S												T	T								S	S	B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		M	D	G	V	I	A	N	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	.	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		X	V	F	A	P	E	W	L	N	E	L	C	D	L	A	H	R	Y	D	A	R	V	L	V	D	E	I	H	A	P	L	V	F	D	G	Q	H	T	V	A	A	G	V	S	D	T	A	A	S	V	C	I	T	I	T	A	P	S	A	W	N	I	A	G	L	K	C	A	Q	I	I	F	S	N	P	S	D	A	E	H
Template Known Secondary structure		B																	T	T								T	T	G	G	G	B	S	S	S					G	G	G	S																				G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																						.	.													.
Query SS confidence																																																						.	.													.
Query Sequence		R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	.	.	G	F	T	L	A	G	A	D	H	A	I	I	.	P	V	M	L	G	D	A	V	V	A	Q	K	F
Query Conservation																																																						.	.													.
Alig confidence																																																						.	.													.
Template Conservation
Template Sequence		W	Q	Q	L	S	P	V	I	K	D	G	A	S	T	L	G	L	I	A	A	E	A	A	Y	R	Y	G	T	D	F	L	N	Q	E	V	A	Y	L	K	N	N	H	D	F	L	L	H	E	I	P	K	R	I	P	G	A	K	I	T	P	X	Q	A	T	Y	L	X	W	I	D	F	R	D	T	T	I	E	G	S	P
Template Known Secondary structure					S																																																	S	T	T							S	B		S							T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		342	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	R	E	L	Q	K	E	.	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q
Query Conservation									.
Alig confidence									.												.													.	.
Template Conservation																					.													.	.
Template Sequence		S	E	F	F	I	E	K	A	K	V	A	X	N	D	G	A	W	F	G	.	E	D	G	T	G	F	C	R	L	N	F	A	.	.	T	S	R	E	V	L	E	E	A	I	D	R	X	A	K	A	V	S	H
Template Known Secondary structure																G	G	G	G		.	G	G	G	T	T								.	.	S																	T	T
Template Predicted Secondary structure																					.													.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions