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Job DescriptionP0AB77
Confidence100.00%DateThu Jan 5 11:14:48 GMT 2012
Rank21Aligned Residues372
% Identity16%Templatec3fcrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TNDLETARAEGL. . . . . . . . . . . . . FKEERIITSAQQADITVADGSHVINFCAN. . . NYLGLANHPDLIAAAKAGMDSHG
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Template Sequence  NDQLDQWDRDNFFHPSTHLAQHARGESANRVIKTASGVFIEDRDGTKLLDAFAGLYCVNVG. YGRQEIAEAIADQARELA
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SSS
T
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BTTT

TTT

S
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S
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   4.....10.........20.........30.........40.........50.........60.... .....70.........80..
 
   74.....80.........90.........100 .........110.........120... ......130.........140..
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Query Sequence  FGMASVRFICGTQDSHKELEQKLAAFL. . GMEDAILYSSCFDANGGLFETLL. . . . . . . . . GAEDAIISDALNHASIIDG
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Template Sequence  Y. . . YHSYVGHGTEASITLAKXILDRAPKNXSKVYFGLGGSDANETNVKLIWYYNNILGRPEKKKIISRWRGYHGSGLVT
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S
TTSSTT
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   83 ......90.........100.........110.........120.........130.........140.........150.........
 
   143......150....... ..160.........170.........180.........190..
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Query Sequence  VRLCKAKRYRYANND. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MQELEARLKEAREAGARHVLIATDGVFSMDGVIAN
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Template Sequence  GSLTGLELFHKKFDLPVEQVIHTEAPYYFRREDLNQTEEQFVAHCVAELEALIEREGAD. . TIAAFIGEPILGTGGIVPP
Template Known Secondary structure  S

GGGTTTTT
S
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S
GGG
S
TT


GG..G
SSBSTTT
B

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   160.........170.........180.........190.........200.........210........ .220.........230.......
 
   193......200.........210.........220.........230.........240.........250.........260......
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Query Sequence  . . . . LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQ. .
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Template Sequence  PAGYWEAIQTVLNKHDILLVADEVVT. GFGRLGTXFGSDHYGLEP. . DIITIAKGLTSAYAPLSGSIVSDKVWKVLEQGT
Template Known Secondary structure 
TTT

TTT.SSSTTSSS
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   238.240.........250.........260... ......270.........280. ........290.........300.........310....
 
   267..270.........280.........290.........300.........310.........320 .........330..
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Query Sequence  . . . . . . RSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTL. AGADHAIIPVML. . . . . . .
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Template Sequence  DENGPIGHGWTYSAHPIGAAAGVANLKLLDELNLVSNAGEVGAYLNATXAEALSQHANVGDVRGEGLLCAVEFVKDRDSR
Template Known Secondary structure 
S
S


TTTT
TTTTSTTSSS

SBTTTT
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   333......340.........350.........360.........370.........380.........390... ..
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Query Sequence  . . . . GDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ. LG
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Template Sequence  TFFDAADKIGPQISAKLLEQDKIIARAXPQG. . . . . DILGFAPPFCLTRAEADQVVEGTLRAVKAVLG
Template Known Secondary structure  B


GGG



SSS.....S


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   395....400.........410.........420..... ....430.........440.........450.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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