Job Description P0AB77 Confidence 99.95% Date Thu Jan 5 11:14:48 GMT 2012 Rank 162 Aligned Residues 321 % Identity 18% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																													.
Query SS confidence								.																																																													.
Query Sequence		S	H	V	I	N	F	.	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	D	A	I	L	.	Y	S	S	C	F	D	A	N	G	G	L	F
Query Conservation								.																																																													.
Alig confidence								.								.	.	.	.												.	.	.	.	.	.	.	.																															.
Template Conservation																.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		Q	S	Q	V	E	L	I	A	S	E	N	I	V	S	.	.	.	.	R	A	V	L	D	A	Q	G	S	V	L	.	.	.	.	.	.	.	.	T	N	K	Y	A	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M
Template Known Secondary structure				S					T	T						.	.	.	.								T	S	G	G	.	.	.	.	.	.	.	.	G	S	S		T	T																	T	T		S							S	S
Template Predicted Secondary structure																.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	G	V	C	D	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template Conservation																														.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template Sequence		L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	A	L	Q	Y	G	V	S	R	D	T	M	.	.	.	.	.	.	.	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	.	.	.	.	.	K	P	S	L	I	I	A	G	F	.	.	S	A	Y	P	R	K	L	D	F	A	R	F	R	A	I
Template Known Secondary structure							T	T																B		T	T	T		.	.	.	.	.	.	.	S	B													.	.	.	.	.			S							.	.	S			S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.															.	.	.	.	.										.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P
Query Conservation
Alig confidence																										.	.	.	.	.																																																.	.	.	.
Template Conservation																										.	.	.	.	.																																																.	.	.	.
Template Sequence		A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	.	.	.	.	.	A	N	P	V	E	H	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	A	V	G	P	L	M	H	V	.	.	.	.
Template Known Secondary structure					T	T								T	T	T						T	T	S	S	.	.	.	.	.			G	G	G	T		S						S	S	G	G	G		S		S							S																			.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.																																																.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																												.	.												.
Query SS confidence																																												.	.												.
Query Sequence		A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	.	.	G	A	D	H	A	I	I	P	V	M	L	.	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F
Query Conservation																																												.	.												.
Alig confidence																																												.	.												.
Template Conservation
Template Sequence		I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K	N	G
Template Known Secondary structure													T	S																								T	T				G	G	G	S		S	S	S							G	G	G	T													T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		357	.	.				360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.													.	.	.	.
Query SS confidence					.	.	.													.	.	.	.
Query Sequence		Y	P	V	.	.	.	V	P	K	G	Q	A	R	I	R	T	Q	M	.	.	.	.	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L	G	V	I
Query Conservation					.	.	.													.	.	.	.
Alig confidence					.	.	.													.	.	.	.
Template Conservation
Template Sequence		I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R	T	N
Template Known Secondary structure			T	T		S	S		T	T	T		S												T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions