Job Description P0AB77 Confidence 99.92% Date Thu Jan 5 11:14:48 GMT 2012 Rank 216 Aligned Residues 326 % Identity 12% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110		.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.																.	.	.								.
Query SS confidence																																														.	.	.	.																.	.	.								.
Query Sequence		I	N	F	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	.	.	.	.	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	.	.	.	D	A	I	L	Y	S	S	.	C	F	D	A	N	G
Query Conservation																																														.	.	.	.																.	.	.								.
Alig confidence							.	.	.	.	.	.																																		.	.	.	.																.	.	.								.
Template Conservation							.	.	.	.	.	.
Template Sequence		L	Y	F	Q	S	.	.	.	.	.	.	M	L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S
Template Known Secondary structure					S		.	.	.	.	.	.													T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		117	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure										.	.																																															.
Query SS confidence										.	.																																															.
Query Sequence		G	L	F	E	T	L	L	G	.	.	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	.	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L
Query Conservation										.	.																																															.
Alig confidence										.	.																																															.																							.
Template Conservation																																																																																	.
Template Sequence		A	V	P	L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.
Template Known Secondary structure								G	G	G	S	T	T									S											T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation		.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	.	.	.	.	.	.	.	.	.	.	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E
Template Known Secondary structure		.	.	.	.	S					T	T								T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	.	.	G		S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G	G
Template Predicted Secondary structure		.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
						164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
													272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	G	A	.	.	.	.	.	.	D	H	A	I	I	P	V	M	L	G	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N
Template Known Secondary structure							T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		335	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		A	V	V	A	.	.	.	.	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L	G	V
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																						.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		A	K	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	.	.	.	.	.	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M	H	Q	L
Template Known Secondary structure		T	T																T	T			S		B			T	T	T	.	.	.	.	.		S							T	T	S
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions